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Comparing the Efficiency of In Situ Visualization Paradigms at Scale

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High Performance Computing (ISC High Performance 2019)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 11501))

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Abstract

This work compares the two major paradigms for doing in situ visualization: in-line, where the simulation and visualization share the same resources, and in-transit, where simulation and visualization are given dedicated resources. Our runs vary many parameters, including simulation cycle time, visualization frequency, and dedicated resources, to study how tradeoffs change over configuration. In particular, we consider simulations as large as 1,024 nodes (16,384 cores) and dedicated visualization resources with as many as 512 nodes (8,192 cores). We draw conclusions about when each paradigm is superior, such as in-line being superior when the simulation cycle time is very fast. Surprisingly, we also find that in-transit can minimize the total resources consumed for some configurations, since it can cause the visualization routines to require fewer overall resources when they run at lower concurrency. For example, one of our scenarios finds that allocating 25% more resources for visualization allows the simulation to run 61% faster than its in-line comparator. Finally, we explore various models for quantifying the cost for each paradigm, and consider transition points when one paradigm is superior to the other. Our contributions inform design decisions for simulation scientists when performing in situ visualization.

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References

  1. Cloverleaf3d. http://uk-mac.github.io/CloverLeaf3D/. Accessed 19 Dec 2018

  2. Adhinarayanan, V., Feng, W.C., Rogers, D., Ahrens, J., Pakin, S.: Characterizing and modeling power and energy for extreme-scale in-situ visualization. In: IEEE Parallel and Distributed Processing Symposium (IPDPS), pp. 978–987 (2017)

    Google Scholar 

  3. Ahern, S., et al.: Scientific Discovery at the Exascale: Report for the DOE ASCR Workshop on Exascale Data Management, Analysis, and Visualization, July 2011

    Google Scholar 

  4. Ahrens, J., Geveci, B., Law, C.: ParaView: an end-user tool for large-data visualization. In: The Visualization Handbook, pp. 717–731 (2005)

    Chapter  Google Scholar 

  5. Ayachit, U., et al.: The SENSEI generic in situ interface. In: Workshop on In Situ Infrastructures for Enabling Extreme-Scale Analysis and Visualization (ISAV), pp. 40–44, November 2016

    Google Scholar 

  6. Ayachit, U., et al.: ParaView catalyst: enabling in situ data analysis and visualization. In: Workshop on In Situ Infrastructures for Enabling Extreme-Scale Analysis and Visualization (ISAV), pp. 25–29 (2015)

    Google Scholar 

  7. Ayachit, U., et al.: Performance analysis, design considerations, and applications of extreme-scale In Situ infrastructures. In: ACM/IEEE Conference for High Performance Computing, Networking, Storage and Analysis (SC16), November 2016

    Google Scholar 

  8. Bauer, A.C., et al.: In Situ methods, infrastructures, and applications on high performance computing platforms, a state-of-the-art (STAR) report. Comput. Graph. Forum 35(3), 577 (2016). Proceedings of Eurovis 2016

    Google Scholar 

  9. Bennett, J.C., et al.: Combining in-situ and in-transit processing to enable extreme-scale scientific analysis. In: Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis, pp. 49:1–49:9 (2012)

    Google Scholar 

  10. Childs, H., et al.: A contract-based system for large data visualization. In: Proceedings of IEEE Visualization 2005, pp. 190–198 (2005)

    Google Scholar 

  11. Childs, H., et al.: Extreme scaling of production visualization software on diverse architectures. IEEE Comput. Graph. Appl. (CG&A) 30(3), 22–31 (2010)

    Article  Google Scholar 

  12. Dayal, J., et al.: Flexpath: type-based publish/subscribe system for large-scale science analytics. In: IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID) (2014)

    Google Scholar 

  13. Docan, C., et al.: Dataspaces: an interaction and coordination framework for coupled simulation workflows. Cluster Comput. 15(2), 163–181 (2012)

    Article  Google Scholar 

  14. Dorier, M., et al.: Damaris/viz: a nonintrusive, adaptable and user-friendly in situ visualization framework. In: IEEE Symposium on Large-Scale Data Analysis and Visualization (LDAV), pp. 67–75, October 2013

    Google Scholar 

  15. Gamell, M., et al.: Exploring power behaviors and trade-offs of in-situ data analytics. In: International Conference on High Performance Computing, Networking, Storage and Analysis (SC), pp. 1–12 (2013)

    Google Scholar 

  16. Goodale, T., et al.: The cactus framework and toolkit: design and applications. In: Palma, J.M.L.M., Sousa, A.A., Dongarra, J., Hernández, V. (eds.) VECPAR 2002. LNCS, vol. 2565, pp. 197–227. Springer, Heidelberg (2003). https://doi.org/10.1007/3-540-36569-9_13

    Chapter  Google Scholar 

  17. Kress, J., et al.: Loosely coupled in situ visualization: a perspective on why it’s here to stay. In: Workshop on In Situ Infrastructures for Enabling Extreme-Scale Analysis and Visualization (ISAV), pp. 1–6, November 2015

    Google Scholar 

  18. Larsen, M., et al.: The ALPINE in situ infrastructure: ascending from the ashes of strawman. In: Workshop on In Situ Infrastructures on Enabling Extreme-Scale Analysis and Visualization (ISAV), pp. 42–46 (2017)

    Google Scholar 

  19. Liu, Q., et al.: Hello ADIOS: the challenges and lessons of developing leadership class I/O frameworks. Concurrency Comput. Pract. Experience 26(7), 1453–1473 (2014)

    Article  Google Scholar 

  20. Mallinson, A., et al.: Cloverleaf: preparing hydrodynamics codes for exascale. The Cray User Group (2013)

    Google Scholar 

  21. Moreland, K., et al.: VTK-m: accelerating the visualization toolkit for massively threaded architectures. Comput. Graph. Appl. 36(3), 48–58 (2016)

    Article  Google Scholar 

  22. Oldfield, R.A., Moreland, K., Fabian, N., Rogers, D.: Evaluation of methods to integrate analysis into a large-scale shock shock physics code. In: Proceedings of the 28th ACM International Conference on Supercomputing, pp. 83–92. ACM (2014)

    Google Scholar 

  23. Parker, S., Johnson, C.: SCIRun: a scientific programming environment for computational steering. In: ACM/IEEE Conference on Supercomputing, p. 52 (1995)

    Google Scholar 

  24. Peterka, T., Ma, K.L.: Parallel image compositing methods. In: High Performance Visualization: Enabling Extreme-Scale Scientific Insight (2012)

    Google Scholar 

  25. Rodero, I., et al.: Evaluation of in-situ analysis strategies at scale for power efficiency and scalability. In: IEEE/ACM Symposium on Cluster, Cloud and Grid Computing (CCGrid), pp. 156–164 (2016)

    Google Scholar 

  26. Whitlock, B., Favre, J., Meredith, J.: Parallel in situ coupling of simulation with a fully featured visualization system. In: Proceedings of the 11th Eurographics Conference on Parallel Graphics and Visualization, pp. 101–109 (2011)

    Google Scholar 

  27. Zhang, F., et al.: In-memory staging and data-centric task placement for coupled scientific simulation workflows. Concurrency Comput. Pract. Experience 29(12), e4147 (2017)

    Article  Google Scholar 

Download references

Acknowledgments

This material is based upon work supported by the U.S. Department of Energy, Office of Science, Office of Advanced Scientific Computing Research, Scientific Discovery through Advanced Computing (SciDAC) program. This research used resources of the Oak Ridge Leadership Computing Facility, which is a DOE Office of Science User Facility supported under Contract DE-AC05-00OR22725. This work was partially performed by UT-Battelle, LLC, with the US Department of Energy. This work was partially performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under contract DE-AC52-07NA27344. Lawrence Livermore National Security, LLC (LLNL-CONF-769101).

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Kress, J. et al. (2019). Comparing the Efficiency of In Situ Visualization Paradigms at Scale. In: Weiland, M., Juckeland, G., Trinitis, C., Sadayappan, P. (eds) High Performance Computing. ISC High Performance 2019. Lecture Notes in Computer Science(), vol 11501. Springer, Cham. https://doi.org/10.1007/978-3-030-20656-7_6

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  • DOI: https://doi.org/10.1007/978-3-030-20656-7_6

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