Quantification, smoothing, and confidence limits for single-units' histograms
- PMID: 6285087
- DOI: 10.1016/0165-0270(82)90002-4
Quantification, smoothing, and confidence limits for single-units' histograms
Abstract
In this article the relationships among firing rate, probability of firing and counts per bin are examined. It is suggested that PSTHs, autocorrelations and crosscorrelations of neuronal activity should all be expressed in units of firing rates (spikes/s), since the values obtained by such scaling are independent of bin size and of total time of measurement. A simple method for these histograms is described. Methods to compute confidence limits for PSTHs, autocorrelations and crosscorrelations are suggested. The computations are based on the null hypothesis that the spike train(s) is (are) the realization of (independent) Poisson-point process(es). The validity and the limitations of these computations methods, when applied to spike trains, are discussed. Methods to smooth out random fluctuation with little distortion of the histogram's shape are described. It is suggested that one can minimize the distortion of the histogram in the time-domain and in the frequency-domain by using a bell-shaped bin whose center point slides continuously along the histogram. The article aims at giving the potential user of the methods some insight for the meaning of the formulae. It describes in detail how the methods are applied in practice and illustrates each method by using real data from single-unit recordings.
Similar articles
-
Effect of stimulation on burst firing in cat primary auditory cortex.J Neurophysiol. 1995 Nov;74(5):1841-55. doi: 10.1152/jn.1995.74.5.1841. J Neurophysiol. 1995. PMID: 8592178
-
The relationship of post-stimulus time and interval histograms to the timing characteristics of spike trains.Biophys J. 1978 Jun;22(3):413-30. doi: 10.1016/S0006-3495(78)85496-4. Biophys J. 1978. PMID: 208679 Free PMC article.
-
Statistical analysis of membrane potential fluctuations. Relation with presynaptic spike train.Biophys J. 1968 Nov;8(11):1256-74. doi: 10.1016/S0006-3495(68)86554-3. Biophys J. 1968. PMID: 4301347 Free PMC article.
-
Generation of spike trains in CNS neurons.Brain Res. 1975 Jan 24;84(1):1-22. doi: 10.1016/0006-8993(75)90796-9. Brain Res. 1975. PMID: 163121 Review.
-
[Neurophysiological characteristics of isolated structures of the cerebral cortex].Usp Fiziol Nauk. 1973 Apr-Jun;4(2):55-100. Usp Fiziol Nauk. 1973. PMID: 4375890 Review. Russian. No abstract available.
Cited by
-
Tuned to Tremor: Increased Sensitivity of Cortico-Basal Ganglia Neurons to Tremor Frequency in the MPTP Nonhuman Primate Model of Parkinson's Disease.J Neurosci. 2023 Nov 8;43(45):7712-7722. doi: 10.1523/JNEUROSCI.0529-23.2023. Epub 2023 Oct 13. J Neurosci. 2023. PMID: 37833067 Free PMC article.
-
Alpha-synuclein oligomers alter the spontaneous firing discharge of cultured midbrain neurons.Front Cell Neurosci. 2023 Jan 20;17:1078550. doi: 10.3389/fncel.2023.1078550. eCollection 2023. Front Cell Neurosci. 2023. PMID: 36744002 Free PMC article.
-
Longitudinal recordings of single units in the basal amygdala during fear conditioning and extinction.Sci Rep. 2021 May 27;11(1):11177. doi: 10.1038/s41598-021-90530-x. Sci Rep. 2021. PMID: 34045527 Free PMC article.
-
Extensive Cortical Convergence to Primate Reticulospinal Pathways.J Neurosci. 2021 Feb 3;41(5):1005-1018. doi: 10.1523/JNEUROSCI.1379-20.2020. Epub 2020 Dec 2. J Neurosci. 2021. PMID: 33268548 Free PMC article.
-
Complex temporal patterns processing by a neural mass model of a cortical column.Cogn Neurodyn. 2019 Aug;13(4):379-392. doi: 10.1007/s11571-019-09531-2. Epub 2019 Apr 6. Cogn Neurodyn. 2019. PMID: 31354883 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources