iBet uBet web content aggregator. Adding the entire web to your favor.
iBet uBet web content aggregator. Adding the entire web to your favor.



Link to original content: https://pubmed.ncbi.nlm.nih.gov/33721355
Phylogenomic analysis restructures the ulvophyceae - PubMed Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2021 Aug;57(4):1223-1233.
doi: 10.1111/jpy.13168. Epub 2021 May 24.

Phylogenomic analysis restructures the ulvophyceae

Affiliations

Phylogenomic analysis restructures the ulvophyceae

Øyvind Saetren Gulbrandsen et al. J Phycol. 2021 Aug.

Abstract

Here, we present new transcriptome sequencing data from seven species of Dasycladales (Ulvophyceae) and a phylogenomic analysis of the Chlorophyta with a particular focus on Ulvophyceae. We have focused on a broad selection of green algal groups and carefully selected genes suitable for reconstructing deep eukaryote evolutionary histories. Increasing the taxon sampling of Dasycladales restructures the Ulvophyceae by identifying Dasycladales as closely related to Scotinosphaerales and Oltmannsiellopsidales. Contrary to previous studies, we do not find support for a close relationship between Dasycladales and a group with Cladophorales and Trentepohliales. Instead, the latter group is sister to the remainder of the Ulvophyceae. Furthermore, our analyses show high and consistent statistical support for a sister relationship between Bryopsidales and Chlorophyceae in trees generated with both homogeneous and heterogeneous (heterotachy) evolutionary models. Our study provides a new framework for interpreting the evolutionary history of Ulvophyceae and the evolution of cellular morphologies.

Keywords: Acetabularia; Bryopsidales; Chlorophyta; Dasycladales; Scotinosphaerales; Ulvophyceae; cytomorphology; evolution; green algae; phylogeny; transcriptomics.

PubMed Disclaimer

Similar articles

Cited by

References

    1. Adl, S. M., Bass, D., Lane, C. E., Lukeš, J., Schoch, C. L., Smirnov, A., Agatha, S., Berney, C., Brown, M. W. & Burki, F. 2019. Revisions to the classification, nomenclature, and diversity of eukaryotes. J. Eukaryot. Microbiol. 66:4-119.
    1. Andrews, S. 2010. FastQC: a quality control tool for high throughput sequence data. Available online at: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
    1. Bankevich, A., Nurk, S., Antipov, D., Gurevich, A. A., Dvorkin, M., Kulikov, A. S., Lesin, V. M., Nikolenko, S. I., Pham, S. & Prjibelski, A. D. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J. Comput. Biol. 19:455-77.
    1. Berger, S. 2006. Photo-Atlas of living Dasycladales. Carnets de Géologie. Brest, 348 pp.
    1. Berger, S., Fettweiss, U., Gleissberg, S., Liddle, L. B., Richter, U., Sawitzky, H. & Zuccarello, G. C. 2003. 18S rDNA phylogeny and evolution of cap development in Polyphysaceae (formerly Acetabulariaceae; Dasycladales, Chlorophyta). Phycologia 42:506-61.

Publication types

LinkOut - more resources