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Link to original content: https://doi.org/10.1099/00207713-36-2-150
Intra- and Intergeneric Similarities of the Ribosomal Ribonucleic Acid Cistrons of Acinetobacter | Microbiology Society
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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo

Volume 36, Issue 2

Intra- and Intergeneric Similarities of the Ribosomal Ribonucleic Acid Cistrons of Free

Abstract

H-labeled rRNA was prepared from ATCC 23055and hybridized with filter-fixed DNA from carefully selected strains, reference strains of taxonomically well-located genera, or some selected misnamed strains. The hybridization parameters, the temperature at which 50% of the hybrid was denatured (T) and percent rRNA binding, were determined. The following conclusions can be drawn from the DNA:rRNA hybridization results, the rRNA similarity map, and a T dendrogram. (i) The genus is rather heterogeneous. It covers a 5°C T range. (ii) A combination of our hybridization data and data from the literature indicates that several additional strains belong in the genus (iii) ATCC 17960 is certainly not a member of the genus (iv) The genus is not related to one of the well-established genera or families, nor is it a true member of one of the previously described rRNA superfamilies. The genus forms a new and separate rRNA branch which is taxonomically slightly more close to rRNA superfamily II ( complex, , etc.) than to rRNA superfamily I (, etc.) and the genus (v) The misnamed species “” and “” belong to the rRNA branch, although they differ from the genus Acinetobacter in several important phenotypic features.

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Copyright © 1986 International Union of Microbiological Societies
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1986-04-01
2024-11-28
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References

  1. Allen D. A., Austin B., Colwell R. R. 1983; Numerical taxonomy of bacterial isolates associated with a freshwater fishery. J. Gen. Microbiol. 129:2043–2062
     [Google Scholar]
  2. Austin B., Rodgers C. J., Forns J. M., Colwell R. R. 1981; Alcaligenes faecalis subsp. homari subsp. nov., a new group of bacteria isolated from moribund lobsters. Int. J. Syst. Bacteriol. 31:72–76
     [Google Scholar]
  3. Baumann P., Doudoroff M., Stanier R. Y. 1968; A study of the Moraxella group. II. Oxidase-negative species (Genus Acinetobacter). J. Bacteriol. 95:1520–1541
     [Google Scholar]
  4. Bauwens M., De Ley J. 1981 Improvements in the taxonomy of Flavobacterium by DNA:rRNA hybridizations. 27–31 Reichenbach H., Weeks O. B.ed The Flavo-bacterium-Cytophaga group Verlag Chemie; Weinheim:
     [Google Scholar]
  5. Bergan T., Vaksvik A. K. 1983; Taxonomic implications of quantitative transformation in Acinetobacter calcoaceticus. Zentralbl. Bakteriol. Hyg. Mikrobiol. 1 Abt. Orig. Reihe A 254:214–228
     [Google Scholar]
  6. Beringer J. E. 1974; R factor transfer in Rhizobium leguminosarum. J. Gen. Microbiol. 84:188–198
     [Google Scholar]
  7. Berland B. R., Bianchi M. G., Maestrini S. Y. 1969; Etude des bactéries associées aux algues marines en culture. Mar. Biol. (Berlin) 2:350–355
     [Google Scholar]
  8. Bdvre K., Fuglesang J. E., Henriksen S. D., Lapage S. P., Lautrop H., Snell J. J. S. 1974; Studies on a collection of gram-negative bacterial strains showing resemblance to Moraxellae: examination by conventional bacteriological methods. Int. J. Syst. Bacteriol. 24:438–446
     [Google Scholar]
  9. Bpvre K., Hagen N. 1981 The family Neisseriaceae: rod-shaped species of the genera Moraxella, Acinetobacter, Kingella, and Neisseria, and the Branhamella group of cocci. 1506–1529 Starr M. P., Stolp H., Triiper H. G., Balows A., Schlegel H. G.ed The prokaryotes. A handbook on habitats, isolation, and identification of bacteria 2 Springer-Verlag; New York:
     [Google Scholar]
  10. Brisou J. 1957; Contribution à l’étude de la systématique des Pseudomonadaceae. Ann. Inst. Pasteur (Paris) 93:397–404
     [Google Scholar]
  11. Brisou J., Prévôt A.-R. 1954; Etudes de systématique bactérienne X. Révision des espèces réunies dans le genre Achromobacter. Ann. Inst. Pasteur (Paris) 86:722–728
     [Google Scholar]
  12. Brooks K., Sodeman T. 1974; Clinical studies on a transformation test for identification of Acinetobacter (Mima and Herellea). Appl. Microbiol. 27:1023–1026
     [Google Scholar]
  13. De Ley J. 1968; DNA base composition and taxonomy of some Acinetobacter strains. Antonie van Leeuwenhoek J. Microbiol. Serol. 34:109–114
     [Google Scholar]
  14. De Ley J., De Smedt J. 1975; Improvements of the membrane filter method for DNA:rRNA hybridizations. Antonie van Leeuwenhoek J. Microbiol. Serol. 41:287–307
     [Google Scholar]
  15. De Ley J., Van Muylem J. 1963; Some applications of deoxyribonucleic acid base composition in bacterial taxonomy. Antonie van Leeuwenhoek J. Microbiol. Serol. 29:344–358
     [Google Scholar]
  16. De Smedt J., De Ley J. 1977; Intra- and intergeneric similarities of Agrobacterium ribosomal ribonucleic acid cistrons. Int. J. Syst. Bacteriol. 27:222–240
     [Google Scholar]
  17. De Vos P., De Ley J. 1983; Intra- and intergeneric similarities of Pseudomonas and Xanthomonas ribosomal ribonucleic acid cistrons. Int. J. Syst. Bacteriol. 33:487–509
     [Google Scholar]
  18. Fox G. E., Stackebrandt E., Hespell R. B., Gibson J., Maniloff J., Dyer T. A., Wolfe R. S., Balch W. E., Tanner R. S., Magrum L. J., Zablen L. B., Blakemore R., Gupta R., Bonen L., Lewis B. J., Stahl D. A., Leuhrsen K. R., Chen K. N., Woese C. R. 1980; The phylogeny of prokaryotes. Science 209:457–463
     [Google Scholar]
  19. Gilardi G. L. 1978 Identification of miscellaneous glucose nonfermenting gram-negative bacteria. 45–65 Gilardi G. L.ed Glucose nonfermenting gramnegative bacteria in clinical microbiology CRC Press, Inc.; Boca Raton, Fla:
     [Google Scholar]
  20. Gillis M., De Ley J. 1980; Intra- and intergeneric similarities of the ribosomal ribonucleic acid cistrons of Acetobacter and Gluconobacter. Int. J. Syst. Bacteriol. 30:7–27
     [Google Scholar]
  21. Gray P. H. H., Thornton H. G. 1928; Soil bacteria that decompose certain aromatic compounds. Centralbl. Bakteriol. Parasitenkd. Infektionskr. Abt. 2 73:74–96
     [Google Scholar]
  22. Henriksen S. D. 1973; Moraxella, Acinetobacter, and the Mimeae. Bacteriol. Rev. 37:522–561
     [Google Scholar]
  23. Henriksen S. D. 1976; Moraxella, Neisseria, Branhamella and Acinetobacter. Annu. Rev. Microbiol. 30:63–83
     [Google Scholar]
  24. Hugh R., Reese R. 1968; A comparison of 120 strains of Bacterium anitratum Schaub and Hauber with the type strain of this species. Int. J. Syst. Bacteriol. 18:207–229
     [Google Scholar]
  25. Jantzen E., Bryn K., Bergan T., Havre K. 1974; Gas chromatography of bacterial whole cell methanolysates. V. Fatty acid composition of neisseriae and moraxellae. Acta Pathol. Microbiol. Scand. Sect. B 82:767–779
     [Google Scholar]
  26. Jantzen E., Bryn K., Bergan T., Bpvre K. 1975; Gas chromatography of bacterial whole cell methanolysates. VII. Fatty acid composition of Acinetobacter in relation to the taxonomy of Neisseriaceae. Acta Pathol. Microbiol. Scand. Sect. B 83:569–580
     [Google Scholar]
  27. Johnson J. L., Anderson R. S., Ordal E. J. 1970; Nucleic acid homologies among oxidase-negative Moraxella species. J. Bacteriol. 101:568–573
     [Google Scholar]
  28. Johnson R., Sneath P. H. A. 1973; Taxonomy of Bordetella and related organisms of the families Achromobacteraceae, Brucellaceae, and Neisseriaceae. Int. J. Syst. Bacteriol. 23:381–404
     [Google Scholar]
  29. Juni E. 1972; Interspecies transformation of Acinetobacter: genetic evidence for a ubiquitous genus. J. Bacteriol. 112:917–931
     [Google Scholar]
  30. Juni E. 1984 Genus III. Acinetobacter Brisou and Prévôt 1954, 727AL. 303–307 Krieg N. R., Holt J. G.ed Bergey’s manual of systematic bacteriology 1 The Williams & Wilkins Co.; Baltimore:
     [Google Scholar]
  31. Juni E., Heym G. A. 1980; Transformation assay for identification of psychrotrophic achromobacters. Appl. Environ. Microbiol. 40:1106–1114
     [Google Scholar]
  32. Kriss A. E., Mishustina I. E., Mitskevich N., Zemtsova E. V. 1967 Microbial populations of oceans and seas. Edited by Fogy G. E. Edward Arnold (Publishers) Ltd.; London: Translated from Russian by Syers K.
     [Google Scholar]
  33. Lessel E. F. 1971; International committee on nomenclature of bacteria. Subcommittee on the Taxonomy of Moraxella and Allied Bacteria. Int. J. Syst. Bacteriol. 21:213–214
     [Google Scholar]
  34. Levine M., Soppeland L. 1926; Bacteria in creamery wastes. Bull. Iowa State Agric. Coll. 77:1–72
     [Google Scholar]
  35. Lysenko O. 1961; Pseudomonas–an attempt at a general classification. J. Gen. Microbiol. 25:379–408
     [Google Scholar]
  36. Morton D. J., Barrett E. L. 1982; Gram-negative respiratory bacteria which cause ropy milk constitute a distinct cluster within the genus Acinetobacter. Curr. Microbiol. 7:107–112
     [Google Scholar]
  37. Nishimura Y., Yamamoto H., Iizuka H. 1979; Taxonomical studies of Acinetobacter species. Cellular fatty acid composition. Z. Allg. Mikrobiol. 16:407–409
     [Google Scholar]
  38. Pagel J. E., Seyfried P. L. 1976; Numerical taxonomy of aquatic Acinetobacter isolates. J. Gen. Microbiol. 95:220–232
     [Google Scholar]
  39. Pinter M., Bende I. 1967; Computer analysis of Acinetobacter Iwoffii (Moraxella Iwoffii) and Acinetobacter anitratus (Moraxella glucidolytica) strains. J. Gen. Microbiol. 46:267–272
     [Google Scholar]
  40. Pinter M., De Ley J. 1969; Overall similarity and DNA base compositions of some Acinetobacter strains. Antonie van Leeuwenhoek J. Microbiol. Serol. 35:209–214
     [Google Scholar]
  41. Samuels S. B., Pittman B., Tatum H. W., Cherry W. B. 1972; Report on a study set of Moraxellae and allied bacteria. Int. J. Syst. Bacteriol. 22:19–38
     [Google Scholar]
  42. Skerman V. B. D., McGowan V., Sneath P. H. A. 1980; Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30:225–420
     [Google Scholar]
  43. Sneath P. H. A. 1982; Status of nomenclature types in the approved lists of bacterial names. Request for an opinion. Int. J. Syst. Bacteriol. 32:459–460
     [Google Scholar]
  44. Sokal R. R., Sneath P. H. A. 1963 Principles of numerical taxonomy. W. H. Freeman and Co.; San Francisco:
     [Google Scholar]
  45. Stapp C., Bortels H. 1934; Mikrobiologische Untersuchungen ueber die Zersetzung von Waldstreu. Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Abt. 2 90:28–66
     [Google Scholar]
  46. Thornley M. J. 1967; A taxonomic study of Acinetobacter and related genera. J. Gen. Microbiol. 49:211–257
     [Google Scholar]
  47. Van Landschoot A., De Ley J. 1983; Intra- and intergeneric similarities of the rRNA cistrons of Alteromonas, Marinomonas (gen. nov.) and some other Gram-negative bacteria. J. Gen. Microbiol. 129:3057–3074
     [Google Scholar]
  48. Van Landschoot A., De Vos P., De Ley J. 1984; An alternative parameter for in DNA:rRNA hybridization studies. Syst. Appl. Microbiol. 5:143–156
     [Google Scholar]
  49. Weeks O. B. 1974 Genus Flavobacterium. 357–364 Buchanan R. E., Gibbons N. F.ed Bergey’s manual of determinative bacteriology, 8th ed.. The Williams & Wilkins Co.; Baltimore:
     [Google Scholar]
  50. Yamamoto M., Iwaki H., Kouno K., Inui T. 1980; Identification of marine methanol-utilizing bacteria. J. Ferment. Technol. 58:99–106
     [Google Scholar]
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Intra- and Intergeneric Similarities of the Ribosomal Ribonucleic Acid Cistrons of Acinetobacter
Int J Syst Evol Microbiol 36, 150 (1986); https://doi.org/10.1099/00207713-36-2-150
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