@article{DBLP:journals/corr/abs-2203-16261,
author = {Mohammed Alser and
Sharon Waymost and
Ram Ayyala and
Brendan Lawlor and
Richard J. Abdill and
Neha Rajkumar and
Nathan LaPierre and
Jaqueline J. Brito and
Andre M. Ribeiro{-}dos{-}Santos and
Can Firtina and
Nour Almadhoun and
Varuni Sarwal and
Eleazar Eskin and
Qiyang Hu and
Derek Strong and
Byoung{-}Do Kim and
Malak S. Abedalthagafi and
Onur Mutlu and
Serghei Mangul},
title = {Packaging, containerization, and virtualization of computational omics
methods: Advances, challenges, and opportunities},
journal = {CoRR},
volume = {abs/2203.16261},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2203.16261},
doi = {10.48550/ARXIV.2203.16261},
eprinttype = {arXiv},
eprint = {2203.16261},
timestamp = {Tue, 05 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2203-16261.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/WalshAPWLKHK18,
author = {Paul Walsh and
Bruno G. Andrade and
Cintia C. Palu and
Jason Wu and
Brendan Lawlor and
Brian Kelly and
Matthias L. Hemmje and
Michael Kramer},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {ImmunoAdept - bringing blood microbiome profiling to the clinical
practice},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1577--1581},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621354},
doi = {10.1109/BIBM.2018.8621354},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/WalshAPWLKHK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/WalshPKLWZW17,
author = {Paul Walsh and
Cintia C. Palu and
Brian Kelly and
Brendan Lawlor and
Jyotsna Talreja Wassan and
Huiru Zheng and
Haiying Wang},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {A metagenomics analysis of rumen microbiome},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {2077--2082},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217980},
doi = {10.1109/BIBM.2017.8217980},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/WalshPKLWZW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/avi/WalshLKMHL16,
author = {Paul Walsh and
Brendan Lawlor and
Brian Kelly and
Timmy Manning and
Timm Heuss and
Markus Leopold},
editor = {Marco X. Bornschlegl and
Felix C. Engel and
Raymond R. Bond and
Matthias L. Hemmje},
title = {Visualizing Next-Generation Sequencing Cancer Data Sets with Cloud
Computing},
booktitle = {Advanced Visual Interfaces. Supporting Big Data Applications - {AVI}
2016 Workshop, {AVI-BDA} 2016, Bari, Italy, June 7-10, 2016, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {10084},
pages = {50--62},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-50070-6\_4},
doi = {10.1007/978-3-319-50070-6\_4},
timestamp = {Thu, 14 Oct 2021 10:31:28 +0200},
biburl = {https://dblp.org/rec/conf/avi/WalshLKMHL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/uic/LawlorW16,
author = {Brendan Lawlor and
Paul Walsh},
title = {The Weekend Warrior: How to Build a Genomic Supercomputer in Your
Spare Time Using Streams and Actors in Scala},
booktitle = {2016 Intl {IEEE} Conferences on Ubiquitous Intelligence {\&} Computing,
Advanced and Trusted Computing, Scalable Computing and Communications,
Cloud and Big Data Computing, Internet of People, and Smart World
Congress (UIC/ATC/ScalCom/CBDCom/IoP/SmartWorld), Toulouse, France,
July 18-21, 2016},
pages = {575--580},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/UIC-ATC-ScalCom-CBDCom-IoP-SmartWorld.2016.0098},
doi = {10.1109/UIC-ATC-SCALCOM-CBDCOM-IOP-SMARTWORLD.2016.0098},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/uic/LawlorW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icsoft/LawlorS07,
author = {Brendan Lawlor and
Jeanne Stynes},
editor = {Joaquim Filipe and
Boris Shishkov and
Markus Helfert},
title = {The Missing Layer - Deficiencies in Current Rich Client Architectures,
and their Remedies},
booktitle = {{ICSOFT} 2007, Proceedings of the Second International Conference
on Software and Data Technologies, Volume SE, Barcelona, Spain, July
22-25, 2007},
pages = {351--356},
publisher = {{INSTICC} Press},
year = {2007},
timestamp = {Tue, 24 Feb 2009 15:20:59 +0100},
biburl = {https://dblp.org/rec/conf/icsoft/LawlorS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
