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2010 – 2019
- 2019
[i10]Julia A. Gustavsen
, Shraddha Pai, Ruth Isserlin, Barry Demchak, Alexander R. Pico:
RCy3: Network biology using Cytoscape from within R. F1000Research 8: 1774 (2019)- 2018
- [i9]Barry Demchak, David Otasek, Alexander R. Pico, Gary D. Bader, Keiichiro Ono, Brett Settle, Eric Sage, John H. Morris, William J. R. Longabaugh, Christian Tannus Lopes, Michael Kucera, Adam Treister, Benno Schwikowski, Piet Molenaar, Trey Ideker:
The Cytoscape Automation app article collection. F1000Research 7: 800 (2018) - [i8]Brett Settle, David Otasek, John H. Morris, Barry Demchak:
Copycat Layout: Network layout alignment via Cytoscape Automation. F1000Research 7: 822 (2018) - [i7]Brett Settle, David Otasek, John H. Morris, Barry Demchak:
aMatReader: Importing adjacency matrices via Cytoscape Automation. F1000Research 7: 823 (2018) - 2017
- [j3]Daniel E. Carlin, Barry Demchak, Dexter Pratt, Eric Sage, Trey Ideker:
Network propagation in the cytoscape cyberinfrastructure. PLoS Comput. Biol. 13(10) (2017) - 2016
- [i6]Braxton Fitts, Ziran Zhang, Massoud Maher, Barry Demchak:
dot-app: a Graphviz-Cytoscape conversion plug-in. F1000Research 5: 2543 (2016) - 2015
- [j2]Georg Summer, Thomas Kelder, Keiichiro Ono, Marijana Radonjic, Stephane Heymans, Barry Demchak:
cyNeo4j: connecting Neo4j and Cytoscape. Bioinform. 31(23): 3868-3869 (2015) - [i5]Keiichiro Ono, Tanja Muetze, Georgi Kolishovski, Paul Shannon, Barry Demchak:
CyREST: Turbocharging Cytoscape Access for External Tools via a RESTful API. F1000Research 4: 478 (2015) - 2014
- [j1]Janusz Dutkowski, Keiichiro Ono, Michael Kramer, Michael Yu, Dexter Pratt, Barry Demchak, Trey Ideker:
NeXO Web: the NeXO ontology database and visualization platform. Nucleic Acids Res. 42(Database-Issue): 1269-1274 (2014) - [i4]Alexander R. Pico, Gary D. Bader, Barry Demchak, Oriol Guitart Pla, Timothy Hull, William J. R. Longabaugh, Christian Tannus Lopes, Samad Lotia, Piet Molenaar, Jason Montojo, John H. Morris, Keiichiro Ono, Benno Schwikowski, David Welker, Trey Ideker:
The Cytoscape app article collection. F1000Research 3: 138 (2014) - [i3]Keiichiro Ono, Barry Demchak, Trey Ideker:
Cytoscape tools for the web age: D3.js and Cytoscape.js exporters. F1000Research 3: 143 (2014) - [i2]David Welker, Barry Demchak:
Porting and using PanGIA for Cytoscape 3: challenges and solutions. F1000Research 3: 150 (2014) - [i1]Barry Demchak, Tim Hull, Michael Reich, Ted Liefeld, Michael E. Smoot, Trey Ideker, Jill P. Mesirov:
Cytoscape: the network visualization tool for GenomeSpace workflows. F1000Research 3: 151 (2014) - 2013
- [b1]Barry Demchak:
Policy driven development : SOA evolvability through late binding. University of California, San Diego, USA, 2013 - 2012
- [c10]Ingolf Krüger, Barry Demchak, Massimiliano Menarini:
Dynamic Service Composition and Deployment with OpenRichServices. Software Service and Application Engineering 2012: 120-146 - [c9]Barry Demchak, Jacqueline Kerr, Fred Raab, Kevin Patrick, Ingolf H. Krüger:
PALMS: A Modern Coevolution of Community and Computing Using Policy Driven Development. HICSS 2012: 2735-2744 - [c8]Barry Demchak, Ingolf Krüger:
Policy Driven Development: Flexible Policy Insertion for Large Scale Systems. POLICY 2012: 17-24
2000 – 2009
- 2008
- [c7]Barry Demchak, Vina Ermagan, Claudiu Farcas, Emilia Farcas, Ingolf H. Krüger, Massimiliano Menarini:
Rich services: addressing challenges of ultra-large-scale software-intensive systems. ULSSIS@ICSE 2008: 29-32 - 2007
- [c6]Barry Demchak, William G. Griswold, Leslie A. Lenert:
Data Quality for Situational Awareness during Mass-Casualty Events. AMIA 2007 - [c5]Barry Demchak, Vina Ermagan, Emilia Farcas, To-ju Huang, Ingolf H. Krüger, Massimiliano Menarini:
A Rich Services Approach to CoCoME. CoCoME 2007: 85-115 - [c4]Matthew Arrott, Barry Demchak, Vina Ermagan, Claudiu Farcas, Emilia Farcas, Ingolf H. Krüger, Massimiliano Menarini:
Rich Services: The Integration Piece of the SOA Puzzle. ICWS 2007: 176-183 - [c3]Barry Demchak, Claudiu Farcas, Emilia Farcas, Ingolf H. Krüger:
The Treasure Map for Rich Services. IRI 2007: 400-405 - 2006
- [c2]Steven W. Brown, William G. Griswold, Barry Demchak, Leslie A. Lenert:
Middleware for Reliable Mobile Medical Workflow Support in Disaster Settings. AMIA 2006 - [c1]Barry Demchak, Theodore C. Chan, William G. Griswold, Leslie Lenert:
Situational Awareness During Mass-Casualty Events: Command and Control. AMIA 2006
Coauthor Index
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