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2020 – today
- 2022
[j5]Peter Zhang
, Alida Palmisano, Ravindra Kumar, Ming-Chung Li, James H. Doroshow, Yingdong Zhao:
TPWshiny: an interactive R/Shiny app to explore cell line transcriptional responses to anti-cancer drugs. Bioinform. 38(2): 570-572 (2022)
2010 – 2019
- 2018
- [j4]Thomas C. Jones Jr, Stefan Hoops, Layne T. Watson, Alida Palmisano, John J. Tyson, Clifford A. Shaffer:
JigCell Model Connector: building large molecular network models from components. Simul. 94(11) (2018) - 2017
- [j3]Alida Palmisano, Yingdong Zhao, Ming-Chung Li, Eric C. Polley, Richard M. Simon:
OpenGeneMed: a portable, flexible and customizable informatics hub for the coordination of next-generation sequencing studies in support of precision medicine trials. Briefings Bioinform. 18(5): 723-734 (2017) - 2015
- [j2]Alida Palmisano, Stefan Hoops, Layne T. Watson, Thomas C. Jones Jr, John J. Tyson, Clifford A. Shaffer:
JigCell Run Manager (JC-RM): a tool for managing large sets of biochemical model parametrizations. BMC Syst. Biol. 9: 95 (2015) - 2014
- [j1]Alida Palmisano, Stefan Hoops, Layne T. Watson, Thomas C. Jones Jr, John J. Tyson, Clifford A. Shaffer:
Multistate Model Builder (MSMB): a flexible editor for compact biochemical models. BMC Syst. Biol. 8: 42 (2014) - 2010
- [b1]Alida Palmisano:
Modelling and Inference Strategies for Biological Systems. University of Trento, Italy, 2010 - [c6]Alida Palmisano:
Coding Biological Systems in a Stochastic Framework - The Case Study of Budding Yeast Cell Cycle. BIOINFORMATICS 2010: 153-159
2000 – 2009
- 2009
- [c5]Paola Lecca, Alida Palmisano:
On the Parameter Inference in Chaotic Chemical Systems. EMS 2009: 175-180 - [c4]Alida Palmisano, Ivan Mura, Corrado Priami:
From ODES to Language-Based, Executable Models of Biological Systems. Pacific Symposium on Biocomputing 2009: 239-250 - [c3]Paola Lecca, Alida Palmisano, Corrado Priami, Guido Sanguinetti:
A new probabilistic generative model of parameter inference in biochemical networks. SAC 2009: 758-765 - [c2]Paola Lecca, Alida Palmisano, Corrado Priami:
Deducing Chemical Reaction Rate Constants and Their Regions of Confidence from Noisy Measurements of Time Series of Concentration. UKSim 2009: 200-205 - [i1]Attila Csikász-Nagy, Adrien Fauré, Roberto Larcher, Paola Lecca, Ivan Mura, Ferenc Jordán, Alida Palmisano, Alessandro Romanel, Sean Sedwards, Heike Siebert, Sylvain Soliman, Denis Thieffry, Judit Zámborszky, Tommaso Mazza, Paolo Ballarini:
Analyzing various models of Circadian Clock and Cell Cycle coupling. Formal Methods in Molecular Biology 2009 - 2008
- [c1]Paolo Ballarini, Tommaso Mazza, Alida Palmisano, Attila Csikász-Nagy:
Studying Irreversible Transitions in a Model of Cell Cycle Regulation. PASM@EPEW 2008: 39-53
Coauthor Index
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