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ORCIDShane C. Burgess
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2010 – 2019
- 2019
[j17]Fiona M. McCarthy
, Ken Pendarvis, Amanda M. Cooksey, Cathy R. Gresham, Matt Bomhoff, Sean Davey, Eric Lyons, Tad S. Sonstegard, Susan M. Bridges, Shane C. Burgess:
Chickspress: a resource for chicken gene expression. Database J. Biol. Databases Curation 2019: baz058 (2019)- 2012
- [j16]Joseph S. Reddy, Ranjit Kumar, James M. Watt, Mark L. Lawrence, Shane C. Burgess, Bindu Nanduri:
Transcriptome profile of a bovine respiratory disease pathogen: Mannheimia haemolytica PHL213. BMC Bioinform. 13(S-15): S4 (2012) - [j15]Shyamesh Kumar, Dusan Kunec, Joram J. Buza, Hsin-I Chiang, Huaijun Zhou, Sugalesini Subramaniam, Ken Pendarvis, Hans H. Cheng, Shane C. Burgess:
Nuclear Factor kappa B is central to Marek's Disease herpesvirus induced neoplastic transformation of CD30 expressing lymphocytes in-vivo. BMC Syst. Biol. 6: 123 (2012) - 2011
- [j14]William S. Sanders, Nan Wang, Susan M. Bridges, Brandon M. Malone, Yoginder S. Dandass, Fiona M. McCarthy, Bindu Nanduri, Mark L. Lawrence, Shane C. Burgess:
The Proteogenomic Mapping Tool. BMC Bioinform. 12: 115 (2011) - [j13]Ranjit Kumar, Shane C. Burgess, Mark L. Lawrence, Bindu Nanduri:
TAAPP: Tiling Array Analysis Pipeline for Prokaryotes. Genom. Proteom. Bioinform. 9(1-2): 56-62 (2011) - [j12]Fiona M. McCarthy, Cathy R. Gresham, Teresia J. Buza, Philippe Chouvarine, Lakshmi R. Pillai, Ranjit Kumar, Seval Ozkan, Hui Wang, Prashanti Manda, Tony Arick, Susan M. Bridges, Shane C. Burgess:
AgBase: supporting functional modeling in agricultural organisms. Nucleic Acids Res. 39(Database-Issue): 497-506 (2011) - [j11]William S. Sanders, C. Ian Johnston, Susan M. Bridges, Shane C. Burgess, Kenneth O. Willeford:
Prediction of Cell Penetrating Peptides by Support Vector Machines. PLoS Comput. Biol. 7(7) (2011) - 2010
- [j10]Prashanti Manda, McKinley G. Freeman, Susan M. Bridges, T. J. Jankun-Kelly, Bindu Nanduri, Fiona M. McCarthy, Shane C. Burgess:
GOModeler- A tool for hypothesis-testing of functional genomics datasets. BMC Bioinform. 11(S-6): S29 (2010) - [p1]Bindu Nanduri, Nan Wang, Mark L. Lawrence, Susan M. Bridges, Shane C. Burgess:
Gene Model Detection Using Mass Spectrometry. Proteome Bioinformatics 2010: 137-144
2000 – 2009
- 2009
- [j9]Bart H. J. van den Berg, Jay H. Konieczka, Fiona M. McCarthy, Shane C. Burgess:
ArrayIDer: automated structural re-annotation pipeline for DNA microarrays. BMC Bioinform. 10 (2009) - [j8]Teresia J. Buza, Ranjit Kumar, Cathy R. Gresham, Shane C. Burgess, Fiona M. McCarthy:
Facilitating functional annotation of chicken microarray data. BMC Bioinform. 10(S-11): 2 (2009) - [j7]Lauren A. Bright, Shane C. Burgess, Bhanu Chowdhary, Cyprianna E. Swiderski, Fiona M. McCarthy:
Structural and functional-annotation of an equine whole genome oligoarray. BMC Bioinform. 10(S-11): 8 (2009) - [j6]Ken Pendarvis, Ranjit Kumar, Shane C. Burgess, Bindu Nanduri:
An automated proteomic data analysis workflow for mass spectrometry. BMC Bioinform. 10(S-11): 17 (2009) - [c2]Nan Wang, Shane C. Burgess, Mark L. Lawrence, Susan Bridges:
Proteogenomic Mapping for Structural Annotation of Prokaryote Genomes. IJCBS 2009: 103-106 - 2008
- [j5]Yoginder S. Dandass, Shane C. Burgess, Mark L. Lawrence, Susan M. Bridges:
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research. BMC Bioinform. 9 (2008) - [j4]Divyaswetha Peddinti, Bindu Nanduri, Abdullah Kaya, Jean M. Feugang, Shane C. Burgess, Erdogan Memili:
Comprehensive proteomic analysis of bovine spermatozoa of varying fertility rates and identification of biomarkers associated with fertility. BMC Syst. Biol. 2: 19 (2008) - [c1]Nan Wang, Changhe Yuan, Shane C. Burgess, Bindu Nanduri, Mark L. Lawrence, Susan Bridges:
Integrating Evidence for Evaluation of Potential Novel Protein-coding Genes Using Bayesian Networks. BIOCOMP 2008: 838-843 - 2007
- [j3]Susan M. Bridges, G. Bryce Magee, Nan Wang, W. Paul Williams, Shane C. Burgess, Bindu Nanduri:
ProtQuant: a tool for the label-free quantification of MudPIT proteomics data. BMC Bioinform. 8(S-7) (2007) - [j2]William S. Sanders, Susan M. Bridges, Fiona M. McCarthy, Bindu Nanduri, Shane C. Burgess:
Prediction of peptides observable by mass spectrometry applied at the experimental set level. BMC Bioinform. 8(S-7) (2007) - [j1]Fiona M. McCarthy, Susan M. Bridges, Nan Wang, G. Bryce Magee, W. Paul Williams, Dawn S. Luthe, Shane C. Burgess:
AgBase: a unified resource for functional analysis in agriculture. Nucleic Acids Res. 35(Database-Issue): 599-603 (2007)
Coauthor Index
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