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2020 – today
- 2023
[c3]Li Tang
, Philip Jones, Scott Pakin:
Harnessing Extreme Heterogeneity for Ocean Modeling with Tensors. ExHET@PPoPP 2023: 3:1-3:6- 2022
- [j23]Rihui Lan, Lili Ju, Zhu Wang, Max D. Gunzburger, Philip Jones:
High-order multirate explicit time-stepping schemes for the baroclinic-barotropic split dynamics in primitive equations. J. Comput. Phys. 457: 111050 (2022) - [i2]Badreddine Noune, Philip Jones, Daniel Justus, Dominic Masters, Carlo Luschi:
8-bit Numerical Formats for Deep Neural Networks. CoRR abs/2206.02915 (2022) - 2021
- [i1]Rihui Lan, Lili Ju, Zhu Wang, Max D. Gunzburger, Philip Jones:
High-Order Multirate Explicit Time-Stepping Schemes for the Baroclinic-Barotropic Split Dynamics in Primitive Equations. CoRR abs/2105.13484 (2021) - 2020
- [j22]Daniel D. Brown, Philip Jones, Samuel Rowlinson, Sean Leavey, Anna C. Green, Daniel Töyrä, Andreas Freise:
Pykat: Python package for modelling precision optical interferometers. SoftwareX 12: 100613 (2020)
2010 – 2019
- 2019
- [j21]Ge Peng, Anthony Arguez, Walter N. Meier, Freja Vamborg, Jake Crouch, Philip Jones:
Sea Ice Climate Normals for Seasonal Ice Monitoring of Arctic and Sub-Regions. Data 4(3): 122 (2019) - [j20]Ge Peng, Anna Milan, Nancy A. Ritchey, Robert P. Partee II, Sonny Zinn, Evan McQuinn, Kenneth S. Casey, Paul Lemieux III, Raisa Ionin, Philip Jones, Arianna Jakositz, Donald Collins:
Practical Application of a Data Stewardship Maturity Matrix for the NOAA OneStop Project. Data Sci. J. 18: 41 (2019) - 2016
- [j19]Ge Peng, Nancy A. Ritchey, Kenneth S. Casey, Edward J. Kearns, Jeffrey L. Privette, Drew Saunders, Philip Jones, Tom Maycock, Steve Ansari:
Scientific Stewardship in the Open Data and Big Data Era - Roles and Responsibilities of Stewards and Other Major Product Stakeholders. D Lib Mag. 22(5/6) (2016) - 2014
- [j18]Philip Jones, David Binns, Hsin-Yu Chang, Matthew Fraser, Weizhong Li, Craig McAnulla, Hamish McWilliam, John Maslen, Alex L. Mitchell, Gift Nuka, Sebastien Pesseat, Antony F. Quinn, Amaia Sangrador-Vegas, Maxim Scheremetjew, Siew-Yit Yong, Rodrigo Lopez, Sarah Hunter:
InterProScan 5: genome-scale protein function classification. Bioinform. 30(9): 1236-1240 (2014) - [j17]Sarah Hunter, Matthew Corbett, Hubert Denise, Matthew Fraser, Alejandra N. González-Beltrán, Christopher I. Hunter, Philip Jones, Rasko Leinonen, Craig McAnulla, Eamonn Maguire, John Maslen, Alex L. Mitchell, Gift Nuka, Arnaud Oisel, Sebastien Pesseat, Rajesh Radhakrishnan, Philippe Rocca-Serra, Maxim Scheremetjew, Peter Sterk, Daniel Vaughan, Guy Cochrane, Dawn Field, Susanna-Assunta Sansone:
EBI metagenomics - a new resource for the analysis and archiving of metagenomic data. Nucleic Acids Res. 42(Database-Issue): 600-606 (2014) - 2012
- [j16]Maria Victoria Schneider, Peter Walter, Marie-Claude Blatter, James Watson, Michelle D. Brazas, Kristian Rother, Aidan Budd, Allegra Via, Celia W. G. van Gelder, Joachim Jacob, Pedro L. Fernandes, Tommi H. Nyrönen, Javier De Las Rivas, Thomas Blicher, Rafael C. Jiménez, Jane E. Loveland, Jennifer McDowall, Philip Jones, Brendan W. Vaughan, Rodrigo Lopez, Teresa K. Attwood, Catherine Brooksbank:
Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers. Briefings Bioinform. 13(3): 383-389 (2012) - [j15]Chris I. Hunter, Alex L. Mitchell, Philip Jones, Craig McAnulla, Sebastien Pesseat, Maxim Scheremetjew, Sarah Hunter:
Metagenomic analysis: the challenge of the data bonanza. Briefings Bioinform. 13(6): 743-746 (2012) - [j14]Sarah Hunter, Philip Jones, Alex L. Mitchell, Rolf Apweiler, Teresa K. Attwood, Alex Bateman, Thomas Bernard, David Binns, Peer Bork, Sarah W. Burge, Edouard De Castro, Penny C. Coggill, Matthew Corbett, Ujjwal Das, Louise C. Daugherty, Lauranne Duquenne, Robert D. Finn, Matthew Fraser, Julian Gough, Daniel H. Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Ivica Letunic, David Lonsdale, Rodrigo Lopez, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Conor McMenamin, Huaiyu Mi, Prudence Mutowo-Meullenet, Nicola J. Mulder, Darren A. Natale, Christine A. Orengo, Sebastien Pesseat, Marco Punta, Antony F. Quinn, Catherine Rivoire, Amaia Sangrador-Vegas, Jeremy D. Selengut, Christian J. A. Sigrist, Maxim Scheremetjew, John G. Tate, Manjulapramila Thimmajanarthanan, Paul D. Thomas, Cathy H. Wu, Corin Yeats, Siew-Yit Yong:
InterPro in 2011: new developments in the family and domain prediction database. Nucleic Acids Res. 40(Database-Issue): 306-312 (2012) - 2011
- [j13]Jonathan M. Guberman, Jiye Ai, Olivier Arnaiz, Joachim Baran, Andrew Blake, Richard A. Baldock, Claude Chelala, David Croft, Anthony Cros, Rosalind J. Cutts, Alex Di Génova, Simon A. Forbes, Takatomo Fujisawa, Emanuela Gadaleta, David M. Goodstein, Gunes Gundem, Bernard Haggarty, Syed Haider, Matthew Hall, Todd W. Harris, Robin Haw, Shen Hu, Simon J. Hubbard, Jack Hsu, Vivek Iyer, Philip Jones, Toshiaki Katayama, Rhoda Kinsella, Lei Kong, Daniel Lawson, Yong Liang, Núria López-Bigas, Jie Luo, Michael J. Lush, Jeremy C. Mason, François Moreews, Nelson Ndegwa, Darren J. Oakley, Christian Perez-Llamas, Michael Primig, Elena Rivkin, Steven Rosanoff, Rebecca Shepherd, Reinhard Simon, William C. Skarnes, Damian Smedley, Linda Sperling, William Spooner, Peter Stevenson, Kevin R. Stone, Jon W. Teague, Jun Wang, Jianxin Wang, Brett Whitty, David Tai Wai Wong, Marie Wong-Erasmus, Long Yao, Ken Youens-Clark, Christina K. Yung, Junjun Zhang, Arek Kasprzyk:
BioMart Central Portal: an open database network for the biological community. Database J. Biol. Databases Curation 2011 (2011) - [j12]Philip Jones, David Binns, Conor McMenamin, Craig McAnulla, Sarah Hunter:
The InterPro BioMart: federated query and web service access to the InterPro Resource. Database J. Biol. Databases Curation 2011 (2011) - 2010
- [j11]Maria Victoria Schneider, James Watson, Teresa K. Attwood, Kristian Rother, Aidan Budd, Jennifer McDowall, Allegra Via, Pedro L. Fernandes, Tommi H. Nyrönen, Thomas Blicher, Philip Jones, Marie-Claude Blatter, Javier De Las Rivas, David Phillip Judge, Wouter van der Gool, Catherine Brooksbank:
Bioinformatics training: a review of challenges, actions and support requirements. Briefings Bioinform. 11(6): 544-551 (2010) - [p1]Philip Jones, Lennart Martens:
Using the PRIDE Proteomics Identifications Database for Knowledge Discovery and Data Analysis. Proteome Bioinformatics 2010: 297-307
2000 – 2009
- 2008
- [j10]Andrew M. Jenkinson, Mario Albrecht, Ewan Birney, Hagen Blankenburg, Thomas A. Down, Robert D. Finn, Henning Hermjakob, Tim J. P. Hubbard, Rafael C. Jiménez, Philip Jones, Andreas Kähäri, Eugene Kulesha, José R. Macías, Gabrielle A. Reeves, Andreas Prlic:
Integrating biological data - the Distributed Annotation System. BMC Bioinform. 9(S-8) (2008) - [j9]Philip Jones, Richard G. Côté, Sang Yun Cho, Sebastian Klie, Lennart Martens, Antony F. Quinn, David Thorneycroft, Henning Hermjakob:
PRIDE: new developments and new datasets. Nucleic Acids Res. 36(Database-Issue): 878-883 (2008) - [j8]Richard G. Côté, Philip Jones, Lennart Martens, Rolf Apweiler, Henning Hermjakob:
The Ontology Lookup Service: more data and better tools for controlled vocabulary queries. Nucleic Acids Res. 36(Web-Server-Issue): 372-376 (2008) - [j7]Jennifer A. Siepen, Khalid Belhajjame, Julian N. Selley, Suzanne M. Embury, Norman W. Paton, Carole A. Goble, Stephen G. Oliver, Robert Stevens, Lucas Zamboulis, Nigel J. Martin, Alexandra Poulovassilis, Philip Jones, Richard G. Côté, Henning Hermjakob, Melissa M. Pentony, David T. Jones, Christine A. Orengo, Simon J. Hubbard:
ISPIDER Central: an integrated database web-server for proteomics. Nucleic Acids Res. 36(Web-Server-Issue): 485-490 (2008) - 2007
- [j6]Richard G. Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob:
The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. BMC Bioinform. 8 (2007) - [j5]Neil Swainston, Jennifer A. Siepen, Andrew R. Jones, Sarah R. Hart, Henning Hermjakob, Philip Jones, Simon J. Hubbard:
Pride Wizard: generation of standards compliant quantitative proteomics data. BMC Syst. Biol. 1(S-1): P27 (2007) - [c2]Sebastian Klie, Lennart Martens, Juan Antonio Vizcaíno, Richard G. Côté, Philip Jones, Rolf Apweiler, Alexander Hinneburg, Henning Hermjakob:
An Application of Latent Topic Document Analysis to Large-Scale Proteomics Databases. German Conference on Bioinformatics 2007: 174-184 - [c1]Sebastian Klie, Alexander Hinneburg, Lennart Martens, Juan Antonio Vizcaíno, Richard G. Côté, Philip Jones, Rolf Apweiler, Henning Hermjakob:
Analysing latent topics in large-scale proteomics. LWA 2007: 73-80 - 2006
- [j4]Richard G. Côté, Philip Jones, Rolf Apweiler, Henning Hermjakob:
The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries. BMC Bioinform. 7: 97 (2006) - [j3]Philip Jones, Richard G. Côté, Lennart Martens, Antony F. Quinn, Chris F. Taylor, William Derache, Henning Hermjakob, Rolf Apweiler:
PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res. 34(Database-Issue): 659-663 (2006) - 2005
- [j2]Philip Jones, Nisha Vinod, Thomas A. Down, Andre Hackmann, Andreas Kähäri, Ernst Kretschmann, Antony F. Quinn, Daniela Wieser, Henning Hermjakob, Rolf Apweiler:
Dasty and UniProt DAS: a perfect pair for protein feature visualization. Bioinform. 21(14): 3198-3199 (2005) - 2001
- [j1]John Hudson, Philip Jones:
Measuring the efficiency of stochastic signals of product quality. Inf. Econ. Policy 13(1): 35-49 (2001)
Coauthor Index
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