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ORCIDJames J. Chen
Person information
Other persons with a similar name
- James Chen — disambiguation page
- James C. Chen
- James K. C. Chen
- James L. Chen
- James R. Chen
- James Y. Chen
- James Z. Chen
- Jiaming James Chen
- Shiuh-Yung James Chen (aka: S.-Y. James Chen)
- Chen-Chien James Hsu
![[0000-0002-3697-8401]](https://dblp.org/img/orcid-mark.12x12.png "0000-0002-3697-8401")
(aka: Chen-Chien J. Hsu) — National Taiwan Normal University, Taipeh, Taiwan (and 2 more)
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2020 – today
- 2021
[c2]Weizhong Zhao, Huyen Le, James J. Chen, Hesha J. Duggirala, Richard Forshee, Taxiarchis Botsis, Henry Francis, Huixiao Hong, Weida Tong, Yi-Ting Hwang, Wen Zou:
Discovering Drug-Drug Associations in the FDA Adverse Event Reporting System Database with Data Mining Approaches. BIBM 2021: 1197-1204
2010 – 2019
- 2017
- [c1]Wen Zou, Weizhong Zhao, James J. Chen, Roger Perkins:
Best Setting of Model Parameters in Applying Topic Modeling on Textual Documents. BCB 2017: 588 - 2016
- [j27]Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou:
A novel procedure on next generation sequencing data analysis using text mining algorithm. BMC Bioinform. 17: 213 (2016) - [j26]Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou:
Erratum to: A novel procedure on next generation sequencing data analysis using text mining algorithm. BMC Bioinform. 17: 301 (2016) - [j25]Hesha J. Duggirala, Joseph M. Tonning, Ella Smith, Roselie A. Bright, John D. Baker, Robert Ball, Carlos Bell, Susan J. Bright-Ponte, Taxiarchis Botsis, Khaled Bouri, Marc Boyer, Keith Burkhart, G. Steven Condrey, James J. Chen, Stuart Chirtel, Ross W. Filice, Henry Francis, Hongying Jiang, Jonathan Levine, David Martin, Taiye Oladipo, Rene O'Neill, Lee Anne M. Palmer, Antonio Paredes, George Rochester, Deborah Sholtes, Ana Szarfman, Hui-Lee Wong, Zhiheng Xu, Taha A. Kass-Hout:
Use of data mining at the Food and Drug Administration. J. Am. Medical Informatics Assoc. 23(2): 428-434 (2016) - 2015
- [j24]Weizhong Zhao, James J. Chen, Roger Perkins, Zhichao Liu, Weigong Ge, Yijun Ding, Wen Zou:
A heuristic approach to determine an appropriate number of topics in topic modeling. BMC Bioinform. 16(S13): S8 (2015) - 2014
- [j23]Weizhong Zhao, Wen Zou, James J. Chen:
Topic modeling for cluster analysis of large biological and medical datasets. BMC Bioinform. 15(S-11): S11 (2014) - 2013
- [j22]Wei-Jiun Lin, James J. Chen:
Class-imbalanced classifiers for high-dimensional data. Briefings Bioinform. 14(1): 13-26 (2013) - [j21]Tzu-Pin Lu, Eric Y. Chuang, James J. Chen:
Identification of reproducible gene expression signatures in lung adenocarcinoma. BMC Bioinform. 14: 371 (2013) - [j20]Wen Zou, Hailin Tang, Weizhong Zhao, Joe Meehan, Steven L. Foley, Wei-Jiun Lin, Hung-Chia Chen, Hong Fang, Rajesh Nayak, James J. Chen:
Data mining tools for Salmonella characterization: application to gel-based fingerprinting analysis. BMC Bioinform. 14(S-14): S15 (2013) - 2010
- [j19]Wei-Jiun Lin, Huey-miin Hsueh, James J. Chen:
Power and sample size estimation in microarray studies. BMC Bioinform. 11: 48 (2010) - [j18]Hong Fang, Joshua Xu, Don Ding, Scott A. Jackson, Isha R. Patel, Jonathan G. Frye, Wen Zou, Rajesh Nayak, Steven L. Foley, James J. Chen, Zhenqiang Su, Yanbin Ye, Steve Turner, Steve Harris, Guangxu Zhou, Carl Cerniglia, Weida Tong:
An FDA bioinformatics tool for microbial genomics research on molecular characterization of bacterial foodborne pathogens using microarrays. BMC Bioinform. 11(S-6): S4 (2010)
2000 – 2009
- 2009
- [j17]Ralph L. Kodell, Bruce A. Pearce, Songjoon Baek, Hojin Moon, Hongshik Ahn, John F. Young, James J. Chen:
A model-free ensemble method for class prediction with application to biomedical decision making. Artif. Intell. Medicine 46(3): 267-276 (2009) - [j16]Songjoon Baek, Chen-An Tsai, James J. Chen:
Development of biomarker classifiers from high-dimensional data. Briefings Bioinform. 10(5): 537-546 (2009) - [j15]Chen-An Tsai, James J. Chen:
Multivariate analysis of variance test for gene set analysis. Bioinform. 25(7): 897-903 (2009) - 2008
- [j14]Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming M. Shi, Roger Perkins, Hong Fang, Joshua Xu, James J. Chen, Tao Han, Jim Kaput, James C. Fuscoe, Weida Tong:
Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples. BMC Bioinform. 9(S-9) (2008) - 2007
- [j13]Hojin Moon, Hongshik Ahn, Ralph L. Kodell, Songjoon Baek, Chien-Ju Lin, James J. Chen:
Ensemble methods for classification of patients for personalized medicine with high-dimensional data. Artif. Intell. Medicine 41(3): 197-207 (2007) - [j12]James J. Chen, Taewon Lee, Robert R. Delongchamp, Tao Chen, Chen-An Tsai:
Significance analysis of groups of genes in expression profiling studies. Bioinform. 23(16): 2104-2112 (2007) - [j11]James J. Chen, Huey-miin Hsueh, Robert R. Delongchamp, Chien-Ju Lin, Chen-An Tsai:
Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data. BMC Bioinform. 8 (2007) - [j10]James J. Chen, Chen-An Tsai, ShengLi Tzeng, Chun-Houh Chen:
Gene selection with multiple ordering criteria. BMC Bioinform. 8 (2007) - [j9]Chen-An Tsai, James J. Chen:
Kernel estimation for adjusted p. Comput. Stat. Data Anal. 51(8): 3885-3897 (2007) - [j8]Hongshik Ahn, Hojin Moon, Melissa J. Fazzari, Noha Lim, James J. Chen, Ralph L. Kodell:
Classification by ensembles from random partitions of high-dimensional data. Comput. Stat. Data Anal. 51(12): 6166-6179 (2007) - 2005
- [j7]Chen-An Tsai, Sue-Jane Wang, Dung-Tsa Chen, James J. Chen:
Sample size for gene expression microarray experiments. Bioinform. 21(8): 1502-1508 (2005) - [j6]Dung-Tsa Chen, James J. Chen, Seng-jaw Soong:
Probe rank approaches for gene selection in oligonucleotide arrays with a small number of replicates. Bioinform. 21(12): 2861-2866 (2005) - [j5]Leming M. Shi, Weida Tong, Hong Fang, Uwe Scherf, Jing Han, Raj K. Puri, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, Zhenqiang Su, Tao Han, James C. Fuscoe, Z. Alex Xu, Tucker A. Patterson, Huixiao Hong, Qian Xie, Roger Perkins, James J. Chen, Daniel A. Casciano:
Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential. BMC Bioinform. 6(S-2) (2005) - [j4]Leming M. Shi, Weida Tong, Zhenqiang Su, Tao Han, Jing Han, Raj K. Puri, Hong Fang, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, William S. Branham, James J. Chen, Z. Alex Xu, Stephen C. Harris, Huixiao Hong, Qian Xie, Roger Perkins, James C. Fuscoe:
Microarray scanner calibration curves: characteristics and implications. BMC Bioinform. 6(S-2) (2005) - [j3]Yunhee Choi, Hongshik Ahn, James J. Chen:
Regression trees for analysis of count data with extra Poisson variation. Comput. Stat. Data Anal. 49(3): 893-915 (2005) - 2004
- [j2]James J. Chen, Robert R. Delongchamp, Chen-An Tsai, Huey-miin Hsueh, Frank Sistare, Karol L. Thompson, Varsha G. Desai, James C. Fuscoe:
Analysis of variance components in gene expression data. Bioinform. 20(9): 1436-1446 (2004) - [j1]Sue-Jane Wang, James J. Chen:
Sample Size for Identifying Differentially Expressed Genes in Microarray Experiments. J. Comput. Biol. 11(4): 714-726 (2004)
Coauthor Index
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