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Gregory R. Grant https://orcid.org/0000-0002-0139-7658 https://www.wikidata.org/entity/Q41045552 https://id.loc.gov/authorities/names/n00006983 https://d-nb.info/gnd/17347389X
Thomas G. Brooks Nicholas F. Lahens Antonijo Mrcela Dimitra Sarantopoulou Soumyashant Nayak Amruta Naik Shaon Sengupta Peter S. Choi Gregory R. Grant BEERS2: RNA-Seq simulation through high fidelity <i>in silico</i> modeling. 2024 25 Briefings Bioinform. 3 https://doi.org/10.1093/bib/bbae164 db/journals/bib/bib25.html#BrooksLMSNNSCG24
Dimitra Sarantopoulou Thomas G. Brooks Soumyashant Nayak Antonijo Mrcela Nicholas F. Lahens Gregory R. Grant Comparative evaluation of full-length isoform quantification from RNA-Seq. 266 2021 22 BMC Bioinform. 1 https://doi.org/10.1186/s12859-021-04198-1 db/journals/bmcbi/bmcbi22.html#SarantopoulouBN21
Scott S. Norton Jorge Vaquero-Garcia Nicholas F. Lahens Gregory R. Grant Yoseph Barash Outlier detection for improved differential splicing quantification from RNA-Seq experiments with replicates. 1488-1497 2018 34 Bioinform. 9 https://doi.org/10.1093/bioinformatics/btx790 https://www.wikidata.org/entity/Q47252957 db/journals/bioinformatics/bioinformatics34.html#NortonVLGB18
Qiwen Hu Eun Ji Kim Jian Feng Gregory R. Grant Elizabeth A. Heller Histone posttranslational modifications predict specific alternative exon subtypes in mammalian brain. 2017 13 PLoS Comput. Biol. 6 https://doi.org/10.1371/journal.pcbi.1005602 https://www.wikidata.org/entity/Q36400544 db/journals/ploscb/ploscb13.html#HuKFGH17
Katharina E. Hayer Angel D. Pizarro Nicholas F. Lahens John B. Hogenesch Gregory R. Grant Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data. 3938-3945 2015 31 Bioinform. 24 https://doi.org/10.1093/bioinformatics/btv488 https://www.wikidata.org/entity/Q30991504 db/journals/bioinformatics/bioinformatics31.html#HayerPLHG15
Cristina Aurrecoechea Ana Barreto John Brestelli Brian P. Brunk Shon Cade Ryan Doherty Steve Fischer Bindu Gajria Xin Gao 0002 Alan R. Gingle Gregory R. Grant Omar S. Harb Mark Heiges Sufen Hu John Iodice Jessica C. Kissinger Eileen T. Kraemer Wei Li 0031 Deborah F. Pinney Brian Pitts David S. Roos Ganesh Srinivasamoorthy Christian J. Stoeckert Jr. Haiming Wang Susanne Warrenfeltz EuPathDB: The Eukaryotic Pathogen database. 684-691 2013 41 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gks1113 https://www.wikidata.org/entity/Q34313331 db/journals/nar/nar41.html#AurrecoecheaBBBCDFGGGGHHHIKKLPPRSSWW13
Gregory R. Grant Michael H. Farkas Angel D. Pizarro Nicholas F. Lahens Jonathan Schug Brian P. Brunk Christian J. Stoeckert Jr. John B. Hogenesch Eric A. Pierce Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). 2518-2528 2011 27 Bioinform. 18 https://doi.org/10.1093/bioinformatics/btr427 https://www.wikidata.org/entity/Q33966703 db/journals/bioinformatics/bioinformatics27.html#GrantFPLSBSHP11
Cristina Aurrecoechea Ana Barreto John Brestelli Brian P. Brunk Elisabet V. Caler Steve Fischer Bindu Gajria Xin Gao 0002 Alan R. Gingle Gregory R. Grant Omar S. Harb Mark Heiges John Iodice Jessica C. Kissinger Eileen T. Kraemer Wei Li 0031 Vishal Nayak Cary Pennington Deborah F. Pinney Brian Pitts David S. Roos Ganesh Srinivasamoorthy Christian J. Stoeckert Jr. Charles Treatman Haiming Wang AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species. 612-619 2011 39 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkq1006 https://www.wikidata.org/entity/Q24616782 db/journals/nar/nar39.html#AurrecoecheaBBBCFGGGGHHIKKLNPPPRSSTW11
Cristina Aurrecoechea John Brestelli Brian P. Brunk Steve Fischer Bindu Gajria Xin Gao 0002 Alan R. Gingle Gregory R. Grant Omar S. Harb Mark Heiges Frank Innamorato John Iodice Jessica C. Kissinger Eileen T. Kraemer Wei Li 0031 John A. Miller 0001 Vishal Nayak Cary Pennington Deborah F. Pinney David S. Roos Chris Ross Ganesh Srinivasamoorthy Christian J. Stoeckert Jr. Ryan Thibodeau Charles Treatman Haiming Wang EuPathDB: a portal to eukaryotic pathogen databases. 415-419 2010 38 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkp941 https://www.wikidata.org/entity/Q33600902 db/journals/nar/nar38.html#AurrecoecheaBBFGGGGHHIIKKLMNPPRRSSTTW10
Martin Aslett Cristina Aurrecoechea Matthew Berriman John Brestelli Brian P. Brunk Mark Carrington Daniel P. Depledge Steve Fischer Bindu Gajria Xin Gao 0002 Malcolm J. Gardner Alan R. Gingle Gregory R. Grant Omar S. Harb Mark Heiges Christiane Hertz-Fowler Robin Houston Frank Innamorato John Iodice Jessica C. Kissinger Eileen T. Kraemer Wei Li 0031 Flora J. Logan John A. Miller 0001 Siddhartha Mitra Peter J. Myler Vishal Nayak Cary Pennington Isabelle Phan Deborah F. Pinney Gowthaman Ramasamy Matthew B. Rogers David S. Roos Chris Ross Dhileep Sivam Deborah F. Smith Ganesh Srinivasamoorthy Christian J. Stoeckert Jr. Sandhya Subramanian Ryan Thibodeau Adrian Tivey Charles Treatman Giles Velarde Haiming Wang TriTrypDB: a functional genomic resource for the Trypanosomatidae. 457-462 2010 38 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkp851 https://www.wikidata.org/entity/Q33601045 db/journals/nar/nar38.html#AslettAB10
Ruth Heller Elisabetta Manduchi Gregory R. Grant Warren J. Ewens A flexible two-stage procedure for identifying gene sets that are differentially expressed. 1019-1025 2009 25 Bioinform. 8 https://doi.org/10.1093/bioinformatics/btp076 https://www.wikidata.org/entity/Q83338108 db/journals/bioinformatics/bioinformatics25.html#HellerMGE09
Cristina Aurrecoechea John Brestelli Brian P. Brunk Jane M. Carlton Jennifer Dommer Steve Fischer Bindu Gajria Xin Gao 0002 Alan R. Gingle Gregory R. Grant Omar S. Harb Mark Heiges Frank Innamorato John Iodice Jessica C. Kissinger Eileen T. Kraemer Wei Li 0031 John A. Miller 0001 Hilary G. Morrison Vishal Nayak Cary Pennington Deborah F. Pinney David S. Roos Chris Ross Christian J. Stoeckert Jr. Steven Sullivan Charles Treatman Haiming Wang GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens <i>Giardia lamblia</i> and <i>Trichomonas vaginalis</i>. 526-530 2009 37 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkn631 https://www.wikidata.org/entity/Q24656241 db/journals/nar/nar37.html#AurrecoecheaBBCDFGGGGHHIIKKLMMNPPRRSSTW09
Cristina Aurrecoechea John Brestelli Brian P. Brunk Jennifer Dommer Steve Fischer Bindu Gajria Xin Gao 0002 Alan R. Gingle Gregory R. Grant Omar S. Harb Mark Heiges Frank Innamorato John Iodice Jessica C. Kissinger Eileen T. Kraemer Wei Li 0031 John A. Miller 0001 Vishal Nayak Cary Pennington Deborah F. Pinney David S. Roos Chris Ross Christian J. Stoeckert Jr. Charles Treatman Haiming Wang PlasmoDB: a functional genomic database for malaria parasites. 539-543 2009 37 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkn814 https://www.wikidata.org/entity/Q29618004 db/journals/nar/nar37.html#AurrecoecheaBBDFGGGGHHIIKKLMNPPRRSTW09
Gregory R. Grant Junmin Liu Christian J. Stoeckert Jr. A practical false discovery rate approach to identifying patterns of differential expression in microarray data. 2684-2690 2005 21 Bioinform. 11 https://doi.org/10.1093/bioinformatics/bti407 https://www.wikidata.org/entity/Q30986006 db/journals/bioinformatics/bioinformatics21.html#GrantLS05
Elisabetta Manduchi Gregory R. Grant H. He Junmin Liu Matthew D. Mailman Angel D. Pizarro Patricia L. Whetzel Christian J. Stoeckert Jr. RAD and the RAD Study-Annotator: an approach to collection, organization and exchange of all relevant information for high-throughput gene expression studies. 2004 20 Bioinform. 4 https://doi.org/10.1093/bioinformatics/btg428 https://www.wikidata.org/entity/Q38462894 db/journals/bioinformatics/bioinformatics20.html#ManduchiGHLMPWS04 452-459
Amit Bahl Brian P. Brunk Jonathan Crabtree Martin J. Fraunholz Bindu Gajria Gregory R. Grant Hagai Ginsburg Dinesh Gupta Jessica C. Kissinger Philip Labo Li Li Matthew D. Mailman Arthur J. Milgram David S. Pearson David S. Roos Jonathan Schug Christian J. Stoeckert Jr. Patricia L. Whetzel PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. 212-215 2003 31 Nucleic Acids Res. 1 db/journals/nar/nar31.html#BahlBCFGGGGKLLMMPRSSW03 https://doi.org/10.1093/nar/gkg081 https://www.wikidata.org/entity/Q30760703
Amit Bahl Brian P. Brunk Ross L. Coppel Jonathan Crabtree Sharon J. Diskin Martin J. Fraunholz Gregory R. Grant Dinesh Gupta Robert L. Huestis Jessica C. Kissinger Philip Labo Li Li Shannon K. McWeeney Arthur J. Milgram David S. Roos Jonathan Schug Christian J. Stoeckert Jr. PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). 87-90 2002 30 Nucleic Acids Res. 1 db/journals/nar/nar30.html#BahlBCCDFGGHKLLMMRSS03 https://doi.org/10.1093/nar/30.1.87 https://www.wikidata.org/entity/Q30667264
Elisabetta Manduchi Gregory R. Grant Steven E. McKenzie G. Christian Overton Saul Surrey Christian J. Stoeckert Jr. Generation of patterns from gene expression data by assigning confidence to differentially expressed genes. 685-698 2000 16 Bioinform. 8 db/journals/bioinformatics/bioinformatics16.html#ManduchiGMOSSS00 https://doi.org/10.1093/bioinformatics/16.8.685 https://www.wikidata.org/entity/Q30620367
Gregory R. Grant Bioinformatics - The Machine Learning Approach. 139-141 2000 24 Comput. Chem. 1 https://doi.org/10.1016/S0097-8485(00)80015-7 db/journals/candc/candc24.html#Grant00
Gregory R. Grant R. S. Spielman Elisabetta Manduchi Vivian G. Cheung Warren J. Ewens Significance testing for genomic mismatch scanning. 182-187 1999 conf/recomb/1999 RECOMB https://doi.org/10.1145/299432.299482 db/conf/recomb/recomb1999.html#GrantSMCE99 Martin Aslett Cristina Aurrecoechea Amit Bahl Yoseph Barash Ana Barreto Matthew Berriman John Brestelli Thomas G. Brooks Brian P. Brunk Shon Cade Elisabet V. Caler Jane M. Carlton Mark Carrington Vivian G. Cheung Peter S. Choi Ross L. Coppel Jonathan Crabtree Daniel P. Depledge Sharon J. Diskin Ryan Doherty Jennifer Dommer Warren J. Ewens Michael H. Farkas Jian Feng Steve Fischer Martin J. Fraunholz Bindu Gajria Xin Gao 0002 Malcolm J. Gardner Alan R. Gingle Hagai Ginsburg Dinesh Gupta Omar S. Harb Katharina HayerKatharina E. Hayer H. He Mark Heiges Elizabeth A. Heller Ruth Heller Christiane Hertz-Fowler John B. Hogenesch Robin Houston Qiwen Hu Sufen Hu Robert L. Huestis Frank Innamorato John Iodice Eun Ji Kim Jessica C. Kissinger Eileen T. Kraemer Philip Labo Nicholas F. Lahens Li Li Wei Li 0031 Junmin Liu Flora J. Logan-KlumplerFlora J. Logan Matthew D. Mailman Elisabetta Manduchi Steven E. McKenzie Shannon K. McWeeney Arthur J. Milgram John A. Miller 0001 Siddhartha Mitra Hilary G. Morrison Antonijo Mrcela Peter J. Myler Amruta Naik Soumyashant Nayak Vishal Nayak Scott S. Norton G. Christian Overton David S. Pearson Cary Pennington Isabelle Phan Eric A. Pierce Deborah F. Pinney Brian Pitts Angel D. Pizarro Gowthaman Ramasamy Matthew B. Rogers David S. Roos Chris Ross Dimitra Sarantopoulou Jonathan Schug Shaon Sengupta Dhileep Sivam Deborah F. Smith R. S. Spielman Ganesh Srinivasamoorthy Christian J. Stoeckert Jr. Sandhya Subramanian Steven Sullivan Saul Surrey Ryan Thibodeau Adrian Tivey Charles Treatman Jorge Vaquero-Garcia Giles Velarde Haiming Wang Susanne Warrenfeltz Patricia L. Whetzel