dblp: Cristal Zuñiga
https://dblp.org/pid/228/8034.html
dblp person page RSS feedWed, 23 Oct 2024 20:35:56 +0200en-USdaily1released under the CC0 1.0 licensedblp@dagstuhl.de (dblp team)dblp@dagstuhl.de (dblp team)Computers/Computer_Science/Publications/Bibliographieshttp://www.rssboard.org/rss-specificationhttps://dblp.org/img/logo.144x51.pngdblp: Cristal Zuñigahttps://dblp.org/pid/228/8034.html14451Pitfalls in Metaheuristics Solving Stoichiometric-Based Optimization Models for Metabolic Networks.https://doi.org/10.3390/a17080336Mónica Fabiola Briones-Báez, Luciano Aguilera-Vázquez, Nelson Rangel-Valdez, Cristal Zuñiga, Ana Lidia Martínez-Salazar, Claudia Gómez Santillán: Pitfalls in Metaheuristics Solving Stoichiometric-Based Optimization Models for Metabolic Networks.Algorithms17(8): 336 (2024)]]>https://dblp.org/rec/journals/algorithms/BrionesBaezARZMS24Thu, 01 Aug 2024 01:00:00 +0200A Domain Decomposition Method for Solution of a PDE-Constrained Generalized Nash Equilibrium Model of Biofilm Community Metabolism.https://doi.org/10.1137/22m1511023Isaac Klapper, Daniel B. Szyld, Xinli Yu, Karsten Zengler, Tianyu Zhang, Cristal Zuñiga: A Domain Decomposition Method for Solution of a PDE-Constrained Generalized Nash Equilibrium Model of Biofilm Community Metabolism.SIAM J. Appl. Math.84(1): 97-113 (2024)]]>https://dblp.org/rec/journals/siamam/KlapperSYZZZ24Thu, 01 Feb 2024 00:00:00 +0100The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions.https://doi.org/10.1371/journal.pcbi.1011371Diego Tec-Campos, Camila Posadas, Juan D. Tibocha-Bonilla, Deepan Thiruppathy, Nathan Glonek, Cristal Zuñiga, Alejandro Zepeda, Karsten Zengler: The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions.PLoS Comput. Biol.19(8) (2023)]]>https://dblp.org/rec/journals/ploscb/Tec-CamposPTTGZ23Sun, 01 Jan 2023 00:00:00 +0100Flux balance analysis of the ammonia-oxidizing bacterium Nitrosomonas europaea ATCC19718 unravels specific metabolic activities while degrading toxic compounds.https://doi.org/10.1371/journal.pcbi.1009828Gabriela Canto-Encalada, Diego Tec-Campos, Juan D. Tibocha-Bonilla, Karsten Zengler, Alejandro Zepeda, Cristal Zuñiga: Flux balance analysis of the ammonia-oxidizing bacterium Nitrosomonas europaea ATCC19718 unravels specific metabolic activities while degrading toxic compounds.PLoS Comput. Biol.18(2) (2022)]]>https://dblp.org/rec/journals/ploscb/Canto-EncaladaT22Sat, 01 Jan 2022 00:00:00 +0100A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types.https://doi.org/10.1371/journal.pcbi.1006644Yara Seif, Jonathan M. Monk, Nathan Mih, Hannah Tsunemoto, Saugat Poudel, Cristal Zuñiga, Jared Broddrick, Karsten Zengler, Bernhard O. Palsson: A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types.PLoS Comput. Biol.15(1) (2019)]]>https://dblp.org/rec/journals/ploscb/SeifMMTPZBZP19Tue, 01 Jan 2019 00:00:00 +0100Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks.https://doi.org/10.1371/journal.pcbi.1007007Adam Rule, Amanda Birmingham, Cristal Zuñiga, Ilkay Altintas, Shih-Cheng Huang, Rob Knight, Niema Moshiri, Mai H. Nguyen, Sara Brin Rosenthal, Fernando Pérez, Peter W. Rose: Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks.PLoS Comput. Biol.15(7) (2019)]]>https://dblp.org/rec/journals/ploscb/RuleBZAHKMNRPR19Tue, 01 Jan 2019 00:00:00 +0100Ten Simple Rules for Reproducible Research in Jupyter Notebooks.http://arxiv.org/abs/1810.08055Adam Rule, Amanda Birmingham, Cristal Zuñiga, Ilkay Altintas, Shih-Cheng Huang, Rob Knight, Niema Moshiri, Mai H. Nguyen, Sara Brin Rosenthal, Fernando Pérez, Peter W. Rose: Ten Simple Rules for Reproducible Research in Jupyter Notebooks.CoRRabs/1810.08055 (2018)]]>https://dblp.org/rec/journals/corr/abs-1810-08055Mon, 01 Jan 2018 00:00:00 +0100