Provider: Schloss Dagstuhl - Leibniz Center for Informatics
Database: dblp computer science bibliography
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TY - JOUR
ID - DBLP:journals/algorithms/BrionesBaezARZMS24
AU - Briones-Báez, Mónica Fabiola
AU - Aguilera-Vázquez, Luciano
AU - Rangel-Valdez, Nelson
AU - Zuñiga, Cristal
AU - Martínez-Salazar, Ana Lidia
AU - Santillán, Claudia Gómez
TI - Pitfalls in Metaheuristics Solving Stoichiometric-Based Optimization Models for Metabolic Networks.
JO - Algorithms
VL - 17
IS - 8
SP - 336
PY - 2024/08/
DO - 10.3390/A17080336
UR - https://doi.org/10.3390/a17080336
ER -
TY - JOUR
ID - DBLP:journals/siamam/KlapperSYZZZ24
AU - Klapper, Isaac
AU - Szyld, Daniel B.
AU - Yu, Xinli
AU - Zengler, Karsten
AU - Zhang, Tianyu
AU - Zuñiga, Cristal
TI - A Domain Decomposition Method for Solution of a PDE-Constrained Generalized Nash Equilibrium Model of Biofilm Community Metabolism.
JO - SIAM J. Appl. Math.
VL - 84
IS - 1
SP - 97
EP - 113
PY - 2024/02/
DO - 10.1137/22M1511023
UR - https://doi.org/10.1137/22m1511023
ER -
TY - JOUR
ID - DBLP:journals/ploscb/Tec-CamposPTTGZ23
AU - Tec-Campos, Diego
AU - Posadas, Camila
AU - Tibocha-Bonilla, Juan D.
AU - Thiruppathy, Deepan
AU - Glonek, Nathan
AU - Zuñiga, Cristal
AU - Zepeda, Alejandro
AU - Zengler, Karsten
TI - The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions.
JO - PLoS Comput. Biol.
VL - 19
IS - 8
PY - 2023//
DO - 10.1371/JOURNAL.PCBI.1011371
UR - https://doi.org/10.1371/journal.pcbi.1011371
ER -
TY - JOUR
ID - DBLP:journals/ploscb/Canto-EncaladaT22
AU - Canto-Encalada, Gabriela
AU - Tec-Campos, Diego
AU - Tibocha-Bonilla, Juan D.
AU - Zengler, Karsten
AU - Zepeda, Alejandro
AU - Zuñiga, Cristal
TI - Flux balance analysis of the ammonia-oxidizing bacterium Nitrosomonas europaea ATCC19718 unravels specific metabolic activities while degrading toxic compounds.
JO - PLoS Comput. Biol.
VL - 18
IS - 2
PY - 2022//
DO - 10.1371/JOURNAL.PCBI.1009828
UR - https://doi.org/10.1371/journal.pcbi.1009828
UR - https://www.wikidata.org/entity/Q113308768
ER -
TY - JOUR
ID - DBLP:journals/ploscb/SeifMMTPZBZP19
AU - Seif, Yara
AU - Monk, Jonathan M.
AU - Mih, Nathan
AU - Tsunemoto, Hannah
AU - Poudel, Saugat
AU - Zuñiga, Cristal
AU - Broddrick, Jared
AU - Zengler, Karsten
AU - Palsson, Bernhard O.
TI - A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types.
JO - PLoS Comput. Biol.
VL - 15
IS - 1
PY - 2019//
DO - 10.1371/JOURNAL.PCBI.1006644
UR - https://doi.org/10.1371/journal.pcbi.1006644
UR - https://www.wikidata.org/entity/Q60914005
ER -
TY - JOUR
ID - DBLP:journals/ploscb/RuleBZAHKMNRPR19
AU - Rule, Adam
AU - Birmingham, Amanda
AU - Zuñiga, Cristal
AU - Altintas, Ilkay
AU - Huang, Shih-Cheng
AU - Knight, Rob
AU - Moshiri, Niema
AU - Nguyen, Mai H.
AU - Rosenthal, Sara Brin
AU - Pérez, Fernando
AU - Rose, Peter W.
TI - Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks.
JO - PLoS Comput. Biol.
VL - 15
IS - 7
PY - 2019//
DO - 10.1371/JOURNAL.PCBI.1007007
UR - https://doi.org/10.1371/journal.pcbi.1007007
UR - https://www.wikidata.org/entity/Q92172545
ER -
TY - Informal or Other Publication
ID - DBLP:journals/corr/abs-1810-08055
AU - Rule, Adam
AU - Birmingham, Amanda
AU - Zuñiga, Cristal
AU - Altintas, Ilkay
AU - Huang, Shih-Cheng
AU - Knight, Rob
AU - Moshiri, Niema
AU - Nguyen, Mai H.
AU - Rosenthal, Sara Brin
AU - Pérez, Fernando
AU - Rose, Peter W.
TI - Ten Simple Rules for Reproducible Research in Jupyter Notebooks.
JO - CoRR
VL - abs/1810.08055
PY - 2018//
UR - http://arxiv.org/abs/1810.08055
ER -
