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ORCIDWaldeyr M. C. Silva
Person information
- affiliation: Federal Institute of Goiás, Formosa, Brazil
- affiliation (PhD 2018): University of Brasília, Brazil
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2020 – today
- 2023
[c20]Pedro H. A. Barros
, Waldeyr M. C. Silva, Marcelo M. Brigido:
transcAnalysis: A Snakemake Pipeline for Differential Expression and Post-transcriptional Modification Analysis. BSB 2023: 106-111- 2022
- [c19]Felipe de Araújo Mesquita, Waldeyr Mendes Cordeiro da Silva, Marlene Teixeira De-Souza:
In Silico Analysis of the Genomic Potential for the Production of Specialized Metabolites of Ten Strains of the Bacillales Order Isolated from the Soil of the Federal District, Brazil. BSB 2022: 158-163 - 2021
- [c18]Matheus Sobrinho, Michel J. F. Rosa, Waldeyr M. C. Silva, Aletéia Patrícia Favacho de Araújo:
Resource Prediction Service for Efficient Execution of Bioinformatics Workflows in Federated Cloud with Machine Learning. BIBM 2021: 1975-1983 - [c17]Mirele C. S. F. Costa, João Victor de Araújo Oliveira, Waldeyr M. C. Silva, Rituparno Sen, Jörg Fallmann, Peter F. Stadler, Maria Emília M. T. Walter:
Machine Learning Studies of Non-coding RNAs based on Artificially Constructed Training Data. BIOINFORMATICS 2021: 176-183 - 2020
- [c16]Manuela M. do Almo, Isabel G. Sousa, Waldeyr Mendes Cordeiro da Silva, Thomas Gatter, Peter F. Stadler, Steve Hoffmann, Andrea Queiroz Maranhão, Marcelo M. Brigido:
Anti-CD3 Stimulated T Cell Transcriptome Reveals Novel ncRNAs and Correlates with a Suppressive Profile. BSB 2020: 180-191 - [c15]Waldeyr Mendes Cordeiro da Silva, Daniela P. de Andrade, Jakob L. Andersen, Maria Emília Telles Walter, Marcelo M. Brigido, Peter F. Stadler, Christoph Flamm:
Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene Synthases. BSB 2020: 247-258 - [e1]João C. Setubal, Waldeyr M. C. Silva:
Advances in Bioinformatics and Computational Biology - 13th Brazilian Symposium on Bioinformatics, BSB 2020, São Paulo, Brazil, November 23-27, 2020, Proceedings. Lecture Notes in Computer Science 12558, Springer 2020, ISBN 978-3-030-65774-1 [contents]
2010 – 2019
- 2019
- [j3]Rodrigo F. Almeida, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Aletéia Patrícia Favacho de Araújo, Maria Emília Telles Walter, Sérgio Lifschitz, Maristela Holanda:
Managing data provenance for bioinformatics workflows using AProvBio. Int. J. Comput. Biol. Drug Des. 12(2): 153-170 (2019) - [j2]Gustavo Cordeiro Galvão Van Erven, Rommel Novaes Carvalho, Waldeyr Mendes Cordeiro da Silva, Sérgio Lifschitz, Harley Vera Olivera, Maristela Holanda:
Designing Graph Databases With GRAPHED. J. Database Manag. 30(1): 41-60 (2019) - [c14]Polyane Wercelens, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Aletéia P. F. Araújo, Sérgio Lifschitz, Maristela Holanda:
Data Provenance Management of Bioinformatics Workflows in Federated Clouds. BIBM 2019: 750-754 - [c13]Dennis Sávio M. da Silva, Waldeyr M. C. Silva, Guo RuiZhe, Ana Paula Bernardi, Ari Melo Mariano, Maristela Holanda:
Big Data Trends in Bioinformatics. BIBM 2019: 1862-1867 - [c12]Cleyton P. dos Reis, Waldeyr M. C. Silva, Luiz C. B. Martins, Rodrigo Pinheiro, Márcio Victorino, Maristela Holanda:
Enhancing Open Government Data With Data Provenance. MEDES 2019: 142-149 - [c11]Giovanni M. Guidini, Waldeyr M. C. Silva, Thalita S. Camargos, Caroline F. B. Mourão, Priscilla Galante, Tainá Raiol, Marcelo de Macedo Brígido, Maria Emília M. T. Walter, Elisabeth N. F. Schwartz:
Venom Gland Peptides of Arthropods from the Brazilian Cerrado Biome Unveiled by Transcriptome Analysis. BSB 2019: 48-57 - [c10]Ingrid Santana, Waldeyr Mendes Cordeiro da Silva, Maristela Holanda:
A NoSQL Solution for Bioinformatics Data Provenance Storage. WorldCIST (1) 2019: 528-537 - 2018
- [c9]Waldeyr Mendes Cordeiro da Silva, Polyane Wercelens, Maria Emília M. T. Walter, Maristela Holanda, Marcelo M. Brigido:
Graph Databases in Molecular Biology. BSB 2018: 50-57 - [c8]Daniel S. Souza, Waldeyr Mendes Cordeiro da Silva, Célia Ghedini Ralha, Maria Emília M. T. Walter:
An Argumentation Theory-Based Multiagent Model to Annotate Proteins. BSB 2018: 66-77 - [c7]Gabriella Esteves, Waldeyr Mendes Cordeiro da Silva, Maria Emília Telles Walter, Marcelo M. Brigido, Fernanda Lima:
Human-Computer Interaction Communicability Evaluation Method Applied to Bioinformatics. WorldCIST (2) 2018: 1001-1008 - [c6]Gustavo Cordeiro Galvão Van Erven, Waldeyr Mendes Cordeiro da Silva, Rommel N. Carvalho, Maristela Holanda:
GRAPHED: A Graph Description Diagram for Graph Databases. WorldCIST (1) 2018: 1141-1151 - 2017
- [j1]Waldeyr Mendes Cordeiro da Silva, Danilo Vilar, Daniel S. Souza, Maria Emília Telles Walter, Maristela Terto de Holanda, Marcelo de Macedo Brígido:
A terpenoid metabolic network modelled as graph database. Int. J. Data Min. Bioinform. 18(1): 74-90 (2017) - [c5]Fernanda Hondo, Polyane Wercelens, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Ingrid Santana, Maria Emília Telles Walter, Aletéia Patrícia Favacho de Araújo, Maristela Holanda, Sérgio Lifschitz:
Data provenance management for bioinformatics workflows using NoSQL database systems in a cloud computing environment. BIBM 2017: 1929-1934 - [c4]Rodrigo F. Almeida, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Maria Emília Telles Walter, Aletéia Patrícia Favacho de Araújo, Maristela Holanda, Sérgio Lifschitz:
AProvBio: An architecture for data provenance in bioinformatics workflows using graph database. BIBM 2017: 2139-2144 - 2016
- [c3]Elvismary Molina de Armas, Edward Hermann Haeusler, Sérgio Lifschitz, Maristela Terto de Holanda, Waldeyr Mendes Cordeiro da Silva, Paulo Cavalcanti Gomes Ferreira:
K-mer Mapping and de Bruijn graphs: The case for velvet fragment assembly. BIBM 2016: 882-889 - [c2]Iasmini Lima, Matheus Oliveira, Diego Kieckbusch, Maristela Holanda, Maria Emília M. T. Walter, Aletéia Patrícia Favacho de Araújo, Márcio Victorino, Waldeyr Mendes Cordeiro da Silva, Sérgio Lifschitz:
An evaluation of data replication for bioinformatics workflows on NoSQL systems. BIBM 2016: 896-901 - [c1]Waldeyr Mendes Cordeiro da Silva, Danilo Vilar, Daniel S. Souza, Maria Emília Telles Walter, Marcelo M. Brigido, Maristela Holanda:
2Path: A terpenoid metabolic network modeled as graph database. BIBM 2016: 1322-1327
Coauthor Index
aka: Maristela Terto de Holanda
aka: Maria Emília Telles Walter
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