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2020 – today
- 2022
[j9]Pengyu Ni, Zhengchang Su
:
PCRMS: a database of predicted cis-regulatory modules and constituent transcription factor binding sites in genomes. Database J. Biol. Databases Curation 2022(2022) (2022)- 2021
- [j8]Qinglin Mei, Guojun Li, Zhengchang Su:
Clustering single-cell RNA-seq data by rank constrained similarity learning. Bioinform. 37(19): 3235-3242 (2021) - 2020
- [j7]Xiangyu Liu, Di Li, Juntao Liu, Zhengchang Su, Guojun Li:
RecBic: a fast and accurate algorithm recognizing trend-preserving biclusters. Bioinform. 36(20): 5054-5060 (2020)
2010 – 2019
- 2019
- [j6]Yang Li, Pengyu Ni, Shaoqiang Zhang, Guojun Li, Zhengchang Su:
ProSampler: an ultrafast and accurate motif finder in large ChIP-seq datasets for combinatory motif discovery. Bioinform. 35(22): 4632-4639 (2019) - 2015
- [j5]Chen Xu, Zhengchang Su:
Identification of cell types from single-cell transcriptomes using a novel clustering method. Bioinform. 31(12): 1974-1980 (2015) - 2013
- [j4]Shaoqiang Zhang, Xiguo Zhou, Chuanbin Du, Zhengchang Su:
SPIC: A novel similarity metric for comparing transcription factor binding site motifs based on information contents. BMC Syst. Biol. 7(S-2): S14 (2013) - 2012
- [c12]Shaoqiang Zhang, Lifen Jiang, Chuanbin Du, Zhengchang Su:
A novel information contents based similarity metric for comparing TFBS motifs. ISB 2012: 32-36 - 2011
- [j3]Shaoqiang Zhang, Shan Li, Meng Niu, Phuc T. Pham, Zhengchang Su:
MotifClick: prediction of cis-regulatory binding sites via merging cliques. BMC Bioinform. 12: 238 (2011) - [c11]Shaoqiang Zhang, Huazhi Sun, Guojun Li, Zhengchang Su:
A Simulated Annealing Algorithm for Resource Allocation and Scheduling with Precedence Constraints in the GLECLUBS/eGLECLUBS Pipelines. CSE 2011: 421-426 - 2010
- [j2]Shaoqiang Zhang, Shan Li, Phuc T. Pham, Zhengchang Su:
Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes. BMC Bioinform. 11: 397 (2010)
2000 – 2009
- 2006
- [j1]Fenglou Mao, Zhengchang Su, Victor Olman, PhuongAn Dam, Zhijie Liu, Ying Xu:
Mapping of orthologous genes in the context of biological pathways: An application of integer programming. Proc. Natl. Acad. Sci. USA 103(1): 129-134 (2006) - [c10]Zhengchang Su, Fenglou Mao, Hongwei Wu, PhuongAn Dam, Xin Chen, Tao Jiang, Victor Olman, Brian Palenik, Ying Xu:
Understanding microbial genomic structures and applications to biological pathway inference. GrC 2006: 23-24 - 2005
- [p1]PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu:
Computational Reconstruction of the carbon fixation pathway in Synechococcus SP. Wh 8102. Advances in Bioinformatics and Its Applications 2005 - 2004
- [c9]Zhengchang Su, PhuongAn Dam, Victor Olman, Ying Xu:
Computational Inference of Transcription Regulation and Response Networks in Synechococcus sp. WH8102. BIBE 2004: 5-8 - [c8]Victor Olman, Hanchuan Peng, Zhengchang Su, Ying Xu:
Mapping of Microbial Pathways through Constrained Mapping of Orthologous Genes. CSB 2004: 363-370 - [c7]Peng Wang, Zhengchang Su, PhuongAn Dam, Ying Xu:
A Knowledge Base for Computational Pathway Reconstruction. CSB 2004: 612-613 - [c6]PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu:
In Silico Construction of the Carbon Fixation Pathway in Synechococcus sp. WH8102. CSB 2004: 614-615 - [c5]Zhengchang Su, PhuongAn Dam, X. Chen, Victor Olman, Tao Jiang, Ying Xu:
Computational Construction of Nitrogen Assimilation Pathway in Cyanobacteria Synechococcus sp. WH8102. CSB 2004: 640-641 - [c4]Fenglou Mao, Zhengchang Su, Victor Olman, David Chuang, Ying Xu:
Pathway Mapping with Operon Information: An Integer-Programming Method. CSB 2004: 642-643 - [c3]Victor Olman, Jizhu Lu, PhuongAn Dam, Zhengchang Su, Ying Xu:
CUBIC: Search for Binding Sites. CSB 2004: 666-667 - [c2]Peng Wang, Zhengchang Su, Jun-tao Guo, Ying Xu:
Structural Analysis of FGFR1 Kinase Activation through Molecular Dynamics Simulation. CSB 2004: 700-701 - 2003
- [c1]Zhengchang Su, PhuongAn Dam, Xin Chen, Victor Olman, Tao Jiang, Brian Palenik, Ying Xu:
Computational Inference of Regulatory Pathways in Microbes. CSB 2003: 631-633
Coauthor Index
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