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ORCIDKresimir Josic
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2020 – today
- 2023
[j44]Hyukpyo Hong
, Mark Jayson Cortez, Yu-Yu Cheng, Hang Joon Kim, Boseung Choi, Kresimir Josic, Jae Kyoung Kim:
Inferring delays in partially observed gene regulation processes. Bioinform. 39(11) (2023)- [j43]Mark Jayson Cortez, Alan Eric Akil, Kresimir Josic, Alexander J. Stewart:
Incorporating Computational Challenges into a Multidisciplinary Course on Stochastic Processes. SIAM Rev. 65(4): 1152-1170 (2023) - 2022
- [j42]Tahra L. Eissa, Joshua I. Gold, Kresimir Josic, Zachary P. Kilpatrick:
Suboptimal human inference can invert the bias-variance trade-off for decisions with asymmetric evidence. PLoS Comput. Biol. 18(7) (2022) - 2021
- [j41]Mark Jayson Cortez, Hyukpyo Hong, Boseung Choi, Jae Kyoung Kim, Kresimir Josic:
Hierarchical Bayesian models of transcriptional and translational regulation processes with delays. Bioinform. 38(1): 187-195 (2021) - [j40]Alan Eric Akil, Robert Rosenbaum, Kresimir Josic:
Balanced networks under spike-time dependent plasticity. PLoS Comput. Biol. 17(5) (2021) - [j39]James J. Winkle, Bhargav R. Karamched, Matthew R. Bennett, William Ott, Kresimir Josic:
Emergent spatiotemporal population dynamics with cell-length control of synthetic microbial consortia. PLoS Comput. Biol. 17(9) (2021) - [i4]Sorena Sarmadi, James J. Winkle, Razan N. Alnahhas, Matthew R. Bennett, Kresimir Josic, Andreas Mang, Robert Azencott:
Stochastic Neural Networks for Automatic Cell Tracking in Microscopy Image Sequences of Bacterial Colonies. CoRR abs/2104.13482 (2021) - 2020
- [j38]Boseung Choi, Yu-Yu Cheng, Selahattin Cinar, William Ott, Matthew R. Bennett, Kresimir Josic, Jae Kyoung Kim:
Bayesian inference of distributed time delay in transcriptional and translational regulation. Bioinform. 36(2): 586-593 (2020) - [j37]Yunjiao Wang, Zachary P. Kilpatrick, Kresimir Josic:
A hierarchical model of perceptual multistability involving interocular grouping. J. Comput. Neurosci. 48(2): 177-192 (2020) - [j36]Bhargav R. Karamched, Simon Stolarczyk, Zachary P. Kilpatrick, Kresimir Josic:
Bayesian Evidence Accumulation on Social Networks. SIAM J. Appl. Dyn. Syst. 19(3): 1884-1919 (2020)
2010 – 2019
- 2019
- [j35]Nicholas W. Barendregt, Kresimir Josic, Zachary P. Kilpatrick:
Analyzing dynamic decision-making models using Chapman-Kolmogorov equations. J. Comput. Neurosci. 47(2-3): 205-222 (2019) - 2018
- [j34]Simon Stolarczyk, Manisha Bhardwaj, Kevin E. Bassler, Wei Ji Ma, Kresimir Josic:
Loss of information in feedforward social networks. J. Complex Networks 6(3): 448-469 (2018) - [i3]Bhargav R. Karamched, Simon Stolarczyk, Zachary P. Kilpatrick, Kresimir Josic:
Optimal Evidence Accumulation on Social Networks. CoRR abs/1810.05909 (2018) - 2017
- [j33]Adrian E. Radillo, Alan Veliz-Cuba, Kresimir Josic, Zachary P. Kilpatrick:
Evidence Accumulation and Change Rate Inference in Dynamic Environments. Neural Comput. 29(6): 1561-1610 (2017) - [j32]Gabriel Koch Ocker, Kresimir Josic, Eric Shea-Brown, Michael A. Buice:
Linking structure and activity in nonlinear spiking networks. PLoS Comput. Biol. 13(6) (2017) - [j31]Mehdi Sadeghpour, Alan Veliz-Cuba, Gábor Orosz, Kresimir Josic, Matthew R. Bennett:
Bistability and oscillations in co-repressive synthetic microbial consortia. Quant. Biol. 5(1): 55-66 (2017) - 2016
- [j30]Alan Veliz-Cuba, Zachary P. Kilpatrick, Kresimir Josic:
Stochastic Models of Evidence Accumulation in Changing Environments. SIAM Rev. 58(2): 264-289 (2016) - [i2]Simon Stolarczyk, Manisha Bhardwaj, Kevin E. Bassler, Wei Ji Ma, Kresimir Josic:
Loss of information in feedforward social networks. CoRR abs/1609.09529 (2016) - 2015
- [j29]Jae Kyoung Kim, Kresimir Josic, Matthew R. Bennett:
The relationship between stochastic and deterministic quasi-steady state approximations. BMC Syst. Biol. 9: 87 (2015) - [j28]Alan Veliz-Cuba, Harel Z. Shouval, Kresimir Josic, Zachary P. Kilpatrick:
Networks that learn the precise timing of event sequences. J. Comput. Neurosci. 39(3): 235-254 (2015) - [j27]Manisha Bhardwaj, Samuel Carroll, Wei Ji Ma, Kresimir Josic:
Visual Decisions in the Presence of Measurement and Stimulus Correlations. Neural Comput. 27(11): 2318-2353 (2015) - [j26]Dimitri Yatsenko, Kresimir Josic, Alexander S. Ecker, Emmanouil Froudarakis, R. James Cotton, Andreas S. Tolias:
Improved Estimation and Interpretation of Correlations in Neural Circuits. PLoS Comput. Biol. 11(3) (2015) - [j25]Truong D. Nguyen-Huu, Chinmaya Gupta, Bo Ma, William Ott, Kresimir Josic, Matthew R. Bennett:
Timing and Variability of Galactose Metabolic Gene Activation Depend on the Rate of Environmental Change. PLoS Comput. Biol. 11(7) (2015) - [j24]Alan Veliz-Cuba, Andrew J. Hirning, Adam A. Atanas, Faiza Hussain, Flavia Vancia, Kresimir Josic, Matthew R. Bennett:
Sources of Variability in a Synthetic Gene Oscillator. PLoS Comput. Biol. 11(12) (2015) - 2014
- [j23]Samuel Carroll, Kresimir Josic, Zachary P. Kilpatrick:
Encoding certainty in bump attractors. J. Comput. Neurosci. 37(1): 29-48 (2014) - 2013
- [j22]James Trousdale, Yu Hu, Eric Shea-Brown, Kresimir Josic:
A generative spike train model with time-structured higher order correlations. Frontiers Comput. Neurosci. 7: 84 (2013) - 2012
- [j21]James Trousdale, Yu Hu, Eric Shea-Brown, Kresimir Josic:
Impact of Network Structure and Cellular Response on Spike Time Correlations. PLoS Comput. Biol. 8(3) (2012) - [j20]Eftychios A. Pnevmatikakis, Keith J. Kelleher, Rebecca Chen, Petter Saggau, Kresimir Josic, Liam Paninski:
Fast Spatiotemporal Smoothing of Calcium Measurements in Dendritic Trees. PLoS Comput. Biol. 8(6) (2012) - 2011
- [j19]Robert Rosenbaum, Kresimir Josic:
Mechanisms That Modulate the Transfer of Spiking Correlations. Neural Comput. 23(5): 1261-1305 (2011) - [j18]Kresimir Josic, José Manuel López, William Ott, LieJune Shiau, Matthew R. Bennett:
Stochastic Delay Accelerates Signaling in Gene Networks. PLoS Comput. Biol. 7(11) (2011) - 2010
- [j17]Robert Rosenbaum, James Trousdale, Kresimir Josic:
Pooling and correlated neural activity. Frontiers Comput. Neurosci. 4: 9 (2010)
2000 – 2009
- 2009
- [j16]Fabien Marpeau, Aditya Barua, Kresimir Josic:
A finite volume method for stochastic integrate-and-fire models. J. Comput. Neurosci. 26(3): 445-457 (2009) - [j15]Kresimir Josic, Eric Shea-Brown, Brent Doiron, Jaime de la Rocha:
Stimulus-Dependent Correlations and Population Codes. Neural Comput. 21(10): 2774-2804 (2009) - [i1]Yudong Sun, Bogdan Danila, Kresimir Josic, Kevin E. Bassler:
Improved community structure detection using a modified fine tuning strategy. CoRR abs/0901.2151 (2009) - 2008
- [j14]Eran Elhaik, Dan Graur, Kresimir Josic:
'Genome order index' should not be used for defining compositional constraints in nucleotide sequences. Comput. Biol. Chem. 32(2): 147 (2008) - [j13]Yulia Timofeeva, Steven J. Cox, Stephen Coombes, Kresimir Josic:
Democratization in a passive dendritic tree: an analytical investigation. J. Comput. Neurosci. 25(2): 228-244 (2008) - [j12]Keith J. Kelleher, V. Hajdik, C. M. Colbert, Kresimir Josic:
Learning by structural remodeling in a class of single cell models. J. Comput. Neurosci. 25(2): 282-295 (2008) - [j11]Kresimir Josic, Robert Rosenbaum:
Unstable Solutions of Nonautonomous Linear Differential Equations. SIAM Rev. 50(3): 570-584 (2008) - 2007
- [j10]Stephen Coombes, Yulia Timofeeva, Carl-Magnus Svensson, Gabriel J. Lord, Kresimir Josic, Steven J. Cox, C. M. Colbert:
Branching dendrites with resonant membrane: a "sum-over-trips" approach. Biol. Cybern. 97(2): 137-149 (2007) - [j9]Jonathan E. Rubin, Kresimir Josic:
The Firing of an Excitable Neuron in the Presence of Stochastic Trains of Strong Synaptic Inputs. Neural Comput. 19(5): 1251-1294 (2007) - 2006
- [j8]Martin Golubitsky, Kresimir Josic, Eric Shea-Brown:
Winding Numbers and Average Frequencies in Phase Oscillator Networks. J. Nonlinear Sci. 16(3): 201-231 (2006) - [j7]Jeff Moehlis, Kresimir Josic, Eric Shea-Brown:
Periodic orbit. Scholarpedia 1(7): 1358 (2006) - [j6]Kresimir Josic, Eric Shea-Brown, Jeff Moehlis:
Isochron. Scholarpedia 1(8): 1361 (2006) - 2005
- [j5]Kresimir Josic, Jonathan E. Rubin:
Deriving Information about Architecture from Activity Patterns in Coupled Cell Systems. SIAM J. Appl. Dyn. Syst. 4(1): 53-77 (2005) - 2004
- [j4]Robert L. Devaney, Kresimir Josic, Yakov Shapiro:
Singular Perturbations of Quadratic Maps. Int. J. Bifurc. Chaos 14(1): 161-169 (2004) - [j3]Robert L. Devaney, Kresimir Josic, Mónica Moreno Rocha, Pradipta Seal, Yakov Shapiro, Alex T. Frumosu:
Playing Catch-up with Iterated Exponentials. Am. Math. Mon. 111(8): 704-709 (2004) - 2001
- [j2]Rachel Wells Hall, Kresimir Josic:
The Mathematics of Musical Instruments. Am. Math. Mon. 108(4): 347-357 (2001) - 2000
- [j1]Rachel Wells Hall, Kresimir Josic:
Planetary Motion and the Duality of Force Laws. SIAM Rev. 42(1): 115-124 (2000)
Coauthor Index
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