Provider: Schloss Dagstuhl - Leibniz Center for Informatics
Database: dblp computer science bibliography
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TY - JOUR
ID - DBLP:journals/bioinformatics/OvchinnikovaSRN20
AU - Ovchinnikova, Katja
AU - Stuart, Lachlan
AU - Rakhlin, Alexander
AU - Nikolenko, Sergey I.
AU - Alexandrov, Theodore
TI - ColocML: machine learning quantifies co-localization between mass spectrometry images.
JO - Bioinform.
VL - 36
IS - 10
SP - 3215
EP - 3224
PY - 2020//
DO - 10.1093/BIOINFORMATICS/BTAA085
UR - https://doi.org/10.1093/bioinformatics/btaa085
UR - https://www.wikidata.org/entity/Q89675863
ER -
TY - JOUR
ID - DBLP:journals/bmcbi/OvchinnikovaKSA20
AU - Ovchinnikova, Katja
AU - Kovalev, Vitaly
AU - Stuart, Lachlan
AU - Alexandrov, Theodore
TI - OffsampleAI: artificial intelligence approach to recognize off-sample mass spectrometry images.
JO - BMC Bioinform.
VL - 21
IS - 1
SP - 129
PY - 2020//
DO - 10.1186/S12859-020-3425-X
UR - https://doi.org/10.1186/s12859-020-3425-x
UR - https://www.wikidata.org/entity/Q91550557
ER -
TY - JOUR
ID - DBLP:journals/bioinformatics/PalmerPFA18
AU - Palmer, Andrew
AU - Phapale, Prasad
AU - Fay, Dominik
AU - Alexandrov, Theodore
TI - Curatr: a web application for creating, curating and sharing a mass spectral library.
JO - Bioinform.
VL - 34
IS - 8
SP - 1436
EP - 1438
PY - 2018//
DO - 10.1093/BIOINFORMATICS/BTX786
UR - https://doi.org/10.1093/bioinformatics/btx786
UR - https://www.wikidata.org/entity/Q47290630
ER -
TY - JOUR
ID - DBLP:journals/jcb/AlexandrovGHSS18
AU - Alexandrov, Theodore
AU - Golyandina, Nina
AU - Holloway, David M.
AU - Shlemov, Alexander
AU - Spirov, Alexander V.
TI - Two-Exponential Models of Gene Expression Patterns for Noisy Experimental Data.
JO - J. Comput. Biol.
VL - 25
IS - 11
SP - 1220
EP - 1230
PY - 2018//
DO - 10.1089/CMB.2017.0063
UR - https://doi.org/10.1089/cmb.2017.0063
UR - https://www.wikidata.org/entity/Q90998552
ER -
TY - Informal or Other Publication
ID - DBLP:journals/dagstuhl-reports/AlexandrovBDS17
AU - Alexandrov, Theodore
AU - Böcker, Sebastian
AU - Dorrestein, Pieter C.
AU - Schymanski, Emma
TI - Computational Metabolomics: Identification, Interpretation, Imaging (Dagstuhl Seminar 17491).
JO - Dagstuhl Reports
VL - 7
IS - 12
SP - 1
EP - 17
PY - 2017//
DO - 10.4230/DAGREP.7.12.1
UR - https://doi.org/10.4230/DagRep.7.12.1
UR - https://www.wikidata.org/entity/Q83868396
ER -
TY - JOUR
ID - DBLP:journals/bioinformatics/PalmerOTLGDVPBA15
AU - Palmer, Andrew
AU - Ovchinnikova, Ekaterina
AU - Thuné, Mikael
AU - Lavigne, Régis
AU - Guével, Blandine
AU - Dyatlov, Andrey
AU - Vitek, Olga
AU - Pineau, Charles
AU - Borén, Mats
AU - Alexandrov, Theodore
TI - Using collective expert judgements to evaluate quality measures of mass spectrometry images.
JO - Bioinform.
VL - 31
IS - 12
SP - 375
EP - 384
PY - 2015//
DO - 10.1093/BIOINFORMATICS/BTV266
UR - https://doi.org/10.1093/bioinformatics/btv266
UR - https://www.wikidata.org/entity/Q28603781
ER -
TY - JOUR
ID - DBLP:journals/bioinformatics/AlexandrovB13
AU - Alexandrov, Theodore
AU - Bartels, Andreas M.
TI - Testing for presence of known and unknown molecules in imaging mass spectrometry.
JO - Bioinform.
VL - 29
IS - 18
SP - 2335
EP - 2342
PY - 2013//
DO - 10.1093/BIOINFORMATICS/BTT388
UR - https://doi.org/10.1093/bioinformatics/btt388
UR - https://www.wikidata.org/entity/Q34844599
ER -
TY - JOUR
ID - DBLP:journals/ploscb/AlexandrovB13
AU - Alexandrov, Theodore
AU - Bourne, Philip E.
TI - Learning How to Run a Lab: Interviews with Principal Investigators.
JO - PLoS Comput. Biol.
VL - 9
IS - 11
PY - 2013//
DO - 10.1371/JOURNAL.PCBI.1003349
UR - https://doi.org/10.1371/journal.pcbi.1003349
UR - https://www.wikidata.org/entity/Q42918176
ER -
TY - JOUR
ID - DBLP:journals/ploscb/RidderBMSCMA13
AU - Ridder, Jeroen de
AU - Bromberg, Yana
AU - Michaut, Magali
AU - Satagopam, Venkata P.
AU - Corpas, Manuel
AU - MacIntyre, Geoff
AU - Alexandrov, Theodore
TI - The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013.
JO - PLoS Comput. Biol.
VL - 9
IS - 11
PY - 2013//
DO - 10.1371/JOURNAL.PCBI.1003350
UR - https://doi.org/10.1371/journal.pcbi.1003350
UR - https://www.wikidata.org/entity/Q41893192
ER -
TY - CHAP
ID - DBLP:series/class/KobargA13
AU - Kobarg, Jan Hendrik
AU - Alexandrov, Theodore
TI - Efficient Spatial Segmentation of Hyper-spectral 3D Volume Data.
BT - Algorithms from and for Nature and Life - Classification and Data Analysis
SP - 95
EP - 103
PY - 2013//
DO - 10.1007/978-3-319-00035-0_9
UR - https://doi.org/10.1007/978-3-319-00035-0_9
ER -
TY - JOUR
ID - DBLP:journals/bmcbi/Alexandrov12
AU - Alexandrov, Theodore
TI - MALDI imaging mass spectrometry: statistical data analysis and current computational challenges.
JO - BMC Bioinform.
VL - 13
IS - S-16
SP - S11
PY - 2012//
DO - 10.1186/1471-2105-13-S16-S11
UR - https://doi.org/10.1186/1471-2105-13-S16-S11
UR - https://www.wikidata.org/entity/Q30578315
ER -
TY - JOUR
ID - DBLP:journals/jib/TredeKOTMA12
AU - Trede, Dennis
AU - Kobarg, Jan Hendrik
AU - Oetjen, Janina
AU - Thiele, Herbert
AU - Maass, Peter
AU - Alexandrov, Theodore
TI - On the Importance of Mathematical Methods for Analysis of MALDI-Imaging Mass Spectrometry Data.
JO - J. Integr. Bioinform.
VL - 9
IS - 1
PY - 2012//
DO - 10.2390/BIECOLL-JIB-2012-189
UR - https://doi.org/10.2390/biecoll-jib-2012-189
UR - https://www.wikidata.org/entity/Q34203599
ER -
TY - JOUR
ID - DBLP:journals/tip/TredeASM12
AU - Trede, Dennis
AU - Alexandrov, Theodore
AU - Sagiv, Chen
AU - Maass, Peter
TI - Magnification of Label Maps With a Topology-Preserving Level-Set Method.
JO - IEEE Trans. Image Process.
VL - 21
IS - 9
SP - 4040
EP - 4053
PY - 2012//
DO - 10.1109/TIP.2012.2199325
UR - https://doi.org/10.1109/TIP.2012.2199325
UR - https://www.wikidata.org/entity/Q40036516
ER -
TY - CPAPER
ID - DBLP:conf/evoW/SpirovGHASL12
AU - Spirov, Alexander V.
AU - Golyandina, Nina
AU - Holloway, David M.
AU - Alexandrov, Theodore
AU - Spirova, Ekaterina N.
AU - Lopes, Francisco J. P.
TI - Measuring Gene Expression Noise in Early Drosophila Embryos: The Highly Dynamic Compartmentalized Micro-environment of the Blastoderm Is One of the Main Sources of Noise.
BT - Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics - 10th European Conference, EvoBIO 2012, Málaga, Spain, April 11-13, 2012. Proceedings
SP - 177
EP - 188
PY - 2012//
DO - 10.1007/978-3-642-29066-4_16
UR - https://doi.org/10.1007/978-3-642-29066-4_16
UR - https://www.wikidata.org/entity/Q60627728
ER -
TY - CPAPER
ID - DBLP:conf/gcb/ChernyavskyAMN12
AU - Chernyavsky, Ilya
AU - Alexandrov, Theodore
AU - Maass, Peter
AU - Nikolenko, Sergey I.
TI - A Two-Step Soft Segmentation Procedure for MALDI Imaging Mass Spectrometry Data.
BT - German Conference on Bioinformatics 2012, GCB 2012, Jena, Germany, September 20-22, 2012.
SP - 39
EP - 48
PY - 2012//
DO - 10.4230/OASICS.GCB.2012.39
UR - https://doi.org/10.4230/OASIcs.GCB.2012.39
ER -
TY - CPAPER
ID - DBLP:conf/gi/ThieleTHAFM12
AU - Thiele, Herbert
AU - Trede, Dennis
AU - Heldmann, Stefan
AU - Alexandrov, Theodore
AU - Fischer, Bernd
AU - Maass, Peter
TI - 3D Visualisierung von Organismen.
BT - 57. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie, 42. Jahrestagung der Gesellschaft für Informatik, Was bewegt uns in der/die Zukunft? - Neue Lebenswelten in der Informationsgesellschaft, GMDS/INFORMATIK 2012, Braunschweig, Germany, September 16-21, 2012
SP - 1535
EP - 1544
PY - 2012//
UR - https://dl.gi.de/handle/20.500.12116/17788
UR - http://subs.emis.de/LNI/Proceedings/Proceedings208/article91.html
ER -
TY - JOUR
ID - DBLP:journals/bioinformatics/AlexandrovK11
AU - Alexandrov, Theodore
AU - Kobarg, Jan Hendrik
TI - Efficient spatial segmentation of large imaging mass spectrometry datasets with spatially aware clustering.
JO - Bioinform.
VL - 27
IS - 13
SP - 230
EP - 238
PY - 2011//
DO - 10.1093/BIOINFORMATICS/BTR246
UR - https://doi.org/10.1093/bioinformatics/btr246
UR - https://www.wikidata.org/entity/Q42068827
ER -
TY - CPAPER
ID - DBLP:conf/iwcs/OvchinnikovaMAH11
AU - Ovchinnikova, Ekaterina
AU - Montazeri, Niloofar
AU - Alexandrov, Theodore
AU - Hobbs, Jerry R.
AU - McCord, Michael C.
AU - Mulkar-Mehta, Rutu
TI - Abductive Reasoning with a Large Knowledge Base for Discourse Processing.
BT - Proceedings of the Ninth International Conference on Computational Semantics, IWCS 2011, January 12-14, 2011, Oxford, UK
PY - 2011//
UR - https://aclanthology.org/W11-0124/
ER -
TY - CPAPER
ID - DBLP:conf/lrec/OvchinnikovaVOBA10
AU - Ovchinnikova, Ekaterina
AU - Vieu, Laure
AU - Oltramari, Alessandro
AU - Borgo, Stefano
AU - Alexandrov, Theodore
TI - Data-Driven and Ontological Analysis of FrameNet for Natural Language Reasoning.
BT - Proceedings of the International Conference on Language Resources and Evaluation, LREC 2010, 17-23 May 2010, Valletta, Malta
PY - 2010//
UR - http://www.lrec-conf.org/proceedings/lrec2010/summaries/84.html
ER -
TY - JOUR
ID - DBLP:journals/bioinformatics/AlexandrovDMDTMT09
AU - Alexandrov, Theodore
AU - Decker, Jens
AU - Mertens, Bart J. A.
AU - Deelder, André M.
AU - Tollenaar, Rob A. E. M.
AU - Maass, Peter
AU - Thiele, Herbert
TI - Biomarker discovery in MALDI-TOF serum protein profiles using discrete wavelet transformation.
JO - Bioinform.
VL - 25
IS - 5
SP - 643
EP - 649
PY - 2009//
DO - 10.1093/BIOINFORMATICS/BTN662
UR - https://doi.org/10.1093/bioinformatics/btn662
UR - https://www.wikidata.org/entity/Q37109837
ER -
TY - CPAPER
ID - DBLP:conf/emnlp/OvchinnikovaAW09
AU - Ovchinnikova, Ekaterina
AU - Alexandrov, Theodore
AU - Wandmacher, Tonio
TI - Automatic Acquisition of the.
BT - Proceedings of the 2009 Conference on Empirical Methods in Natural Language Processing, EMNLP 2009, 6-7 August 2009, Singapore, A meeting of SIGDAT, a Special Interest Group of the ACL
SP - 1388
EP - 1397
PY - 2009//
UR - https://aclanthology.org/D09-1144/
ER -
TY - CPAPER
ID - DBLP:conf/gcb/Alexandrov09
AU - Alexandrov, Theodore
TI - Self-taught Learning for Classification of Mass Spectrometry Data: A Case Study of Colorectal Cancer.
BT - German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany
SP - 45
EP - 54
PY - 2009//
UR - https://dl.gi.de/handle/20.500.12116/20309
UR - http://subs.emis.de/LNI/Proceedings/Proceedings157/article5383.html
ER -
TY - JOUR
ID - DBLP:journals/jece/AlexandrovGS08
AU - Alexandrov, Theodore
AU - Golyandina, Nina
AU - Spirov, Alexander V.
TI - Singular Spectrum Analysis of Gene Expression Profiles of Early 