{"id":"https://openalex.org/W3172361984","doi":"https://doi.org/10.7717/peerj-cs.1537","title":"Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction","display_name":"Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction","publication_year":2023,"publication_date":"2023-10-03","ids":{"openalex":"https://openalex.org/W3172361984","doi":"https://doi.org/10.7717/peerj-cs.1537","mag":"3172361984","pmid":"https://pubmed.ncbi.nlm.nih.gov/37810355"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.7717/peerj-cs.1537","pdf_url":null,"source":{"id":"https://openalex.org/S4210178049","display_name":"PeerJ Computer Science","issn_l":"2376-5992","issn":["2376-5992"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320104","host_organization_name":"PeerJ, Inc.","host_organization_lineage":["https://openalex.org/P4310320104"],"host_organization_lineage_names":["PeerJ, Inc."],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","indexed_in":["arxiv","crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.7717/peerj-cs.1537","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100439438","display_name":"Lin Pan","orcid":"https://orcid.org/0000-0001-5271-6295"},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Pan","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026668723","display_name":"Xiaochao Yan","orcid":"https://orcid.org/0000-0002-4358-6588"},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaochao Yan","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047873598","display_name":"Yaoyong Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaoyong Zheng","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073494285","display_name":"Liqin Huang","orcid":"https://orcid.org/0000-0001-8602-6380"},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liqin Huang","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000511351","display_name":"Zhen Zhang","orcid":"https://orcid.org/0000-0003-1559-625X"},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhen Zhang","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088871763","display_name":"Rongda Fu","orcid":null},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongda Fu","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100638209","display_name":"Bin Zheng","orcid":"https://orcid.org/0000-0001-8429-5384"},"institutions":[{"id":"https://openalex.org/I129708740","display_name":"Fujian Medical University","ror":"https://ror.org/050s6ns64","country_code":"CN","type":"education","lineage":["https://openalex.org/I129708740"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Zheng","raw_affiliation_strings":["Key Laboratory of Cardio-Thoracic Surgery, Fujian Medical University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cardio-Thoracic Surgery, Fujian Medical University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I129708740"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100775129","display_name":"Shaohua Zheng","orcid":"https://orcid.org/0000-0002-9133-705X"},"institutions":[{"id":"https://openalex.org/I80947539","display_name":"Fuzhou University","ror":"https://ror.org/011xvna82","country_code":"CN","type":"education","lineage":["https://openalex.org/I80947539"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shaohua Zheng","raw_affiliation_strings":["College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China"],"affiliations":[{"raw_affiliation_string":"College of Physics and Information Engineering, Fuzhou University, Fuzhou, Fujian, China","institution_ids":["https://openalex.org/I80947539"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1395,"currency":"USD","value_usd":1395,"provenance":"doaj"},"apc_paid":{"value":1395,"currency":"USD","value_usd":1395,"provenance":"doaj"},"fwci":1.774,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.69065,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":85,"max":89},"biblio":{"volume":"9","issue":null,"first_page":"e1537","last_page":"e1537"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T10202","display_name":"Diagnosis and Treatment of Lung Cancer","score":0.9883,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10202","display_name":"Diagnosis and Treatment of Lung Cancer","score":0.9883,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12419","display_name":"Analysis of Cardiac and Respiratory Sounds","score":0.9425,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ct-screening","display_name":"CT Screening","score":0.497377},{"id":"https://openalex.org/keywords/coronary-arteries","display_name":"Coronary arteries","score":0.47663534}],"concepts":[{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.53696835},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.528743},{"id":"https://openalex.org/C2777202286","wikidata":"https://www.wikidata.org/wiki/Q9609","display_name":"Vein","level":2,"score":0.5036275},{"id":"https://openalex.org/C2780940725","wikidata":"https://www.wikidata.org/wiki/Q206280","display_name":"Pulmonary artery","level":2,"score":0.47963008},{"id":"https://openalex.org/C2778742706","wikidata":"https://www.wikidata.org/wiki/Q18361829","display_name":"Coronary arteries","level":3,"score":0.47663534},{"id":"https://openalex.org/C2776820930","wikidata":"https://www.wikidata.org/wiki/Q9655","display_name":"Artery","level":2,"score":0.46388847},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44689047},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.44204533},{"id":"https://openalex.org/C2780689522","wikidata":"https://www.wikidata.org/wiki/Q535352","display_name":"Pulmonary vein","level":3,"score":0.42076623},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.33619845},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20150629},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.1552245},{"id":"https://openalex.org/C164705383","wikidata":"https://www.wikidata.org/wiki/Q10379","display_name":"Cardiology","level":1,"score":0.12694317},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C2778902805","wikidata":"https://www.wikidata.org/wiki/Q322177","display_name":"Ablation","level":2,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.7717/peerj-cs.1537","pdf_url":null,"source":{"id":"https://openalex.org/S4210178049","display_name":"PeerJ Computer Science","issn_l":"2376-5992","issn":["2376-5992"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320104","host_organization_name":"PeerJ, Inc.","host_organization_lineage":["https://openalex.org/P4310320104"],"host_organization_lineage_names":["PeerJ, Inc."],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"http://arxiv.org/abs/2103.11736","pdf_url":"http://arxiv.org/pdf/2103.11736","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":["Cornell University"],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false},{"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557495","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37810355","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},{"is_oa":false,"landing_page_url":"https://api.datacite.org/dois/10.48550/arxiv.2103.11736","pdf_url":null,"source":{"id":"https://openalex.org/S4393179698","display_name":"DataCite API","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210145204","host_organization_name":"DataCite","host_organization_lineage":["https://openalex.org/I4210145204"],"host_organization_lineage_names":["DataCite"],"type":"metadata"},"license":null,"license_id":null,"version":null}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.7717/peerj-cs.1537","pdf_url":null,"source":{"id":"https://openalex.org/S4210178049","display_name":"PeerJ Computer Science","issn_l":"2376-5992","issn":["2376-5992"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320104","host_organization_name":"PeerJ, Inc.","host_organization_lineage":["https://openalex.org/P4310320104"],"host_organization_lineage_names":["PeerJ, Inc."],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.71}],"grants":[],"datasets":[],"versions":[],"referenced_works_count":35,"referenced_works":["https://openalex.org/W150412472","https://openalex.org/W1637661457","https://openalex.org/W1997059947","https://openalex.org/W2023504571","https://openalex.org/W2027003306","https://openalex.org/W2067871685","https://openalex.org/W2120268328","https://openalex.org/W2168732003","https://openalex.org/W2183399505","https://openalex.org/W2213701027","https://openalex.org/W2343704263","https://openalex.org/W2345716184","https://openalex.org/W2406126541","https://openalex.org/W2560455603","https://openalex.org/W2688918945","https://openalex.org/W2800884849","https://openalex.org/W2902537990","https://openalex.org/W2943922129","https://openalex.org/W2952846208","https://openalex.org/W2986682582","https://openalex.org/W2999602293","https://openalex.org/W3035315884","https://openalex.org/W3112734236","https://openalex.org/W3132106430","https://openalex.org/W3161907156","https://openalex.org/W3165670649","https://openalex.org/W3168744923","https://openalex.org/W3176469180","https://openalex.org/W3178667756","https://openalex.org/W3197958505","https://openalex.org/W3201244659","https://openalex.org/W4206841660","https://openalex.org/W4224990358","https://openalex.org/W4225513423","https://openalex.org/W4307544895"],"related_works":["https://openalex.org/W4383669989","https://openalex.org/W4238572897","https://openalex.org/W2426035691","https://openalex.org/W2414481425","https://openalex.org/W2412542586","https://openalex.org/W2384919234","https://openalex.org/W2360477194","https://openalex.org/W2357990663","https://openalex.org/W2064753718","https://openalex.org/W2021562513"],"abstract_inverted_index":{"With":[0],"the":[1,7,47,51,96,101,111,119,122,144,156,168,178,216],"wide":[2],"application":[3],"of":[4,9,29,53,100,121,146,175],"CT":[5,17,41,201,212],"scanning,":[6],"separation":[8],"pulmonary":[10,63,191],"arteries":[11,36,64,115,124,147,192],"and":[12,37,50,65,72,88,98,116,118,138,148,160,181,193,195,210],"veins":[13,38,66,117,149,194],"(A/V)":[14],"based":[15,67],"on":[16,68,155,177,183],"images":[18,42,202],"plays":[19],"an":[20,172],"important":[21],"role":[22],"for":[23,60,199],"assisting":[24],"surgeons":[25],"in":[26,39],"preoperative":[27],"planning":[28],"lung":[30],"cancer":[31],"surgery.":[32],"However,":[33],"distinguishing":[34],"between":[35,114],"chest":[40,200],"remains":[43],"challenging":[44],"due":[45],"to":[46,94,109,142],"complex":[48],"structure":[49],"presence":[52],"their":[54],"similarities.We":[55],"proposed":[56,151,169],"a":[57,73,104,132],"novel":[58],"method":[59,170,187],"automatically":[61],"separating":[62],"vessel":[69,79],"topology":[70,81,133],"information":[71],"twin-pipe":[74,105],"deep":[75],"learning":[76],"network.":[77],"First,":[78],"tree":[80],"is":[82,107,153],"constructed":[83],"by":[84],"combining":[85],"scale-space":[86],"particles":[87],"multi-stencils":[89],"fast":[90],"marching":[91],"(MSFM)":[92],"methods":[93],"ensure":[95],"continuity":[97],"authenticity":[99],"topology.":[102],"Second,":[103],"network":[106],"designed":[108,131],"learn":[110],"multiscale":[112],"differences":[113],"characteristics":[120],"small":[123],"that":[125,135],"closely":[126],"accompany":[127],"bronchi.":[128],"Finally,":[129],"we":[130],"optimizer":[134],"considers":[136],"interbranch":[137],"intrabranch":[139],"topological":[140],"relationships":[141],"optimize":[143],"results":[145],"classification.The":[150],"approach":[152],"validated":[154],"public":[157],"dataset":[158],"CARVE14":[159,179],"our":[161,184],"private":[162],"dataset.":[163],"Compared":[164],"with":[165],"ground":[166],"truth,":[167],"achieves":[171],"average":[173],"accuracy":[174],"90.1%":[176],"dataset,":[180],"96.2%":[182],"local":[185],"dataset.The":[186],"can":[188],"effectively":[189],"separate":[190],"has":[196],"good":[197],"generalization":[198],"from":[203,215],"different":[204],"devices,":[205],"as":[206,208],"well":[207],"enhanced":[209],"noncontrast":[211],"image":[213],"sequences":[214],"same":[217],"device.":[218]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W3172361984","counts_by_year":[{"year":2024,"cited_by_count":3}],"updated_date":"2024-11-28T19:27:37.635554","created_date":"2021-06-22"}