{"id":"https://openalex.org/W1601201751","doi":"https://doi.org/10.1007/11510888_33","title":"Prediction of Secondary Protein Structure Content from Primary Sequence Alone \u2013 A Feature Selection Based Approach","display_name":"Prediction of Secondary Protein Structure Content from Primary Sequence Alone \u2013 A Feature Selection Based Approach","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1601201751","doi":"https://doi.org/10.1007/11510888_33","mag":"1601201751"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1007/11510888_33","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"book series"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"book-chapter","type_crossref":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088423732","display_name":"Lukasz Kurgan","orcid":"https://orcid.org/0000-0002-7749-0314"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Lukasz Kurgan","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Alberta, Edmonton, Alberta, T6G 2V4, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Alberta, Edmonton, Alberta, T6G 2V4, Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081173964","display_name":"Leila Homaeian","orcid":null},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Leila Homaeian","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Alberta, Edmonton, Alberta, T6G 2V4, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Alberta, Edmonton, Alberta, T6G 2V4, Canada","institution_ids":["https://openalex.org/I154425047"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392,"provenance":"doaj"},"apc_paid":null,"fwci":6.203,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":16,"citation_normalized_percentile":{"value":0.903261,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":85,"max":86},"biblio":{"volume":null,"issue":null,"first_page":"334","last_page":"345"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Prediction of Protein Subcellular Localization","score":0.9997,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Prediction of Protein Subcellular Localization","score":0.9997,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure Prediction and Analysis","score":0.9993,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"Ribosome Structure and Translation Mechanisms","score":0.9953,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/secondary-structure-prediction","display_name":"Secondary Structure Prediction","score":0.645298},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.63069665},{"id":"https://openalex.org/keywords/proteins","display_name":"Proteins","score":0.540938},{"id":"https://openalex.org/keywords/protein-synthesis","display_name":"Protein Synthesis","score":0.538252},{"id":"https://openalex.org/keywords/support-vector-machines","display_name":"Support Vector Machines","score":0.518274},{"id":"https://openalex.org/keywords/homology-modeling","display_name":"Homology Modeling","score":0.517506},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4909206},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.482687},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.43440014}],"concepts":[{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.7507357},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7297388},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.63069665},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5295252},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.51783115},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.50580454},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4909206},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.482687},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.47886392},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.43440014},{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.4289413},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4189922},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41611782},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35798606},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.1894533},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09820378},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1007/11510888_33","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"book series"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":20,"referenced_works":["https://openalex.org/W1491459594","https://openalex.org/W1518578533","https://openalex.org/W1913497435","https://openalex.org/W1978918258","https://openalex.org/W1982025738","https://openalex.org/W1982776802","https://openalex.org/W1994402758","https://openalex.org/W2025906944","https://openalex.org/W2033447595","https://openalex.org/W2076241020","https://openalex.org/W2084500867","https://openalex.org/W2086301041","https://openalex.org/W2089907517","https://openalex.org/W2103210188","https://openalex.org/W2110251730","https://openalex.org/W2122393563","https://openalex.org/W2130479394","https://openalex.org/W2137165067","https://openalex.org/W2148853951","https://openalex.org/W4240824703"],"related_works":["https://openalex.org/W4386564352","https://openalex.org/W2952668426","https://openalex.org/W2933325505","https://openalex.org/W2472013057","https://openalex.org/W2386796734","https://openalex.org/W2117934800","https://openalex.org/W2083563479","https://openalex.org/W2078778136","https://openalex.org/W2031291218","https://openalex.org/W2020577335"],"abstract_inverted_index":{"Research":[0],"in":[1,13,113],"protein":[2,45,65,94],"structure":[3,47],"and":[4,16,25,53,88,108,149],"function":[5],"is":[6,126,140],"one":[7],"of":[8,44,63,72,84,99,105,137],"the":[9,100,109],"most":[10],"important":[11],"subjects":[12],"modern":[14],"bioinformatics":[15],"computational":[17],"biology.":[18],"It":[19],"often":[20],"uses":[21],"advanced":[22],"data":[23],"mining":[24],"machine":[26],"learning":[27],"methodologies":[28],"to":[29,120,142],"perform":[30],"prediction":[31,43,129,145],"or":[32],"pattern":[33],"recognition":[34],"tasks.":[35],"This":[36],"paper":[37],"describes":[38],"a":[39,60,69,134],"new":[40],"method":[41,58],"for":[42,146,152],"secondary":[46],"content":[48,151],"based":[49,67],"on":[50,68,91],"feature":[51,76,106],"selection":[52,77,107],"multiple":[54],"linear":[55],"regression.":[56],"The":[57,75,103,128],"develops":[59],"novel":[61,110],"representation":[62,111,125],"primary":[64],"sequences":[66],"large":[70,82],"set":[71,83,136],"495":[73],"features.":[74],"task":[78],"performed":[79,90],"using":[80],"very":[81],"nearly":[85],"6,000":[86],"proteins,":[87],"tests":[89,130],"standard":[92,124],"non-homologues":[93],"sets":[95],"confirm":[96],"high":[97],"quality":[98],"developed":[101],"solution.":[102],"application":[104],"resulted":[112],"14-15%":[114],"error":[115],"rate":[116],"reduction":[117],"when":[118,123],"compared":[119],"results":[121],"achieved":[122],"used.":[127],"also":[131],"show":[132],"that":[133],"small":[135],"5-25":[138],"features":[139],"sufficient":[141],"achieve":[143],"accurate":[144],"both":[147],"helix":[148],"strand":[150],"non-homologous":[153],"proteins.":[154]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W1601201751","counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2024-11-18T16:40:05.711234","created_date":"2016-06-24"}
