iBet uBet web content aggregator. Adding the entire web to your favor.
iBet uBet web content aggregator. Adding the entire web to your favor.



Link to original content: http://www.ncbi.nlm.nih.gov/pubmed/18776214
ExplorEnz: the primary source of the IUBMB enzyme list - PubMed Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2009 Jan;37(Database issue):D593-7.
doi: 10.1093/nar/gkn582. Epub 2008 Sep 6.

ExplorEnz: the primary source of the IUBMB enzyme list

Andrew G McDonald  1 , Sinéad Boyce, Keith F Tipton
Affiliations

ExplorEnz: the primary source of the IUBMB enzyme list

Andrew G McDonald et al. Nucleic Acids Res. 2009 Jan.

Abstract

ExplorEnz is the MySQL database that is used for the curation and dissemination of the International Union of Biochemistry and Molecular Biology (IUBMB) Enzyme Nomenclature. A simple web-based query interface is provided, along with an advanced search engine for more complex Boolean queries. The WWW front-end is accessible at http://www.enzyme-database.org, from where downloads of the database as SQL and XML are also available. An associated form-based curatorial application has been developed to facilitate the curation of enzyme data as well as the internal and public review processes that occur before an enzyme entry is made official. Suggestions for new enzyme entries, or modifications to existing ones, can be made using the forms provided at http://www.enzyme-database.org/forms.php.

PubMed Disclaimer

Figures

Figure 1.
Figure 1.
(a) The default search interface of ExplorEnz, which shows an example of a search within the EC-number field for sub-subclass 1.3.3.−. (b) An example of ExplorEnz output, showing the first two enzyme entries returned for the query shown in (a).
Figure 2.
Figure 2.
EC table of contents. Enzyme classes, subclasses and sub-subclasses can be opened or closed by clicking on the ‘+’ or ‘−’ symbols. Clicking on a partial EC number selects the range of EC numbers it contains while clicking on a full EC number shows the full entry for that enzyme. The class and sub-class headings are linked to descriptions of their contents.
See this image and copyright information in PMC

Similar articles

See all similar articles

Cited by

See all "Cited by" articles

References

    1. IUBMB. Enzyme Nomenclature: Recommendations (1992) of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology. San Diego, CA: Academic Press; 1992. Accessible at: http://www.chem.qmul.ac.uk/iubmb/enzyme/ (2 September 2008, date last accessed)
    1. McDonald AG, Boyce S, Moss GP, Dixon HBF, Tipton KF. ExplorEnz: a MySQL database of the IUBMB enzyme nomenclature. BMC Biochem. 2007;8:14. - PMC - PubMed
    1. Tipton KF, Boyce S. In: Nature Encyclopedia of Life Sciences. London: Nature Publishing Group; 2000. Enzyme Classification and Nomenclature.
    1. Boyce S, Tipton KF. History of the enzyme nomenclature system. Bioinformatics. 2000;16:34–40. - PubMed
    1. Schomburg I, Chang A, Ebeling C, Gremse M, Heldt C, Huhn G, Schomburg D. BRENDA, the enzyme database: updates and major new developments. Nucleic Acids Res. 2004;32:D431–D433. - PMC - PubMed