mzSpecLib: A standard format to exchange/distribute spectral libraries

resemble is an R package which implements functions dedicated to non-linear modelling of complex spectroscopy data

Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to large spectral libraries at a high performance.

High quality in silico spectral library generation for data-independent acquisition proteomics

Generate a DIA hybrid spectral library combining an initial DIA library and a targeted virtual library for DIA data processing.

A package for MSMS spectral library prediction models from the field of (phospho-)proteomics, intended to facilitate the testing and comparison of different neural network architectures and existing models.

A Python script to convert the spectral library in BLIB format (.blib) from either Skyline or BiblioSpec to readable library format (OpenSwath or Spectronaut libraries)

Extract the identified peptides and proteins from spectral library search of DIA proteomic data in Skyline

Extracts the features of peptide spectral library for better understanding and its efficient usage in DIA database search

Generate a spectral library for Spectronaut from MS Annika results.