Generalized SEIR Epidemic Model (fitting and computation)

Simulators for Compartmental Models in Epidemiology

A tool for modeling infectious diseases.

A free, open-source tool for modeling chemical reaction networks in Python

A simple Python library for compartment models

T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born denta…

The Flexible Epidemic Modeling Pipeline

Open source epidemiological modeling in Python

CE-ABC is a code to simulate the epidemic outbreaks with mechanistic models through a cross-entropy approximate Bayesian framework.

Python SIR-x model implementation

Code for modeling RSV resurgence following contact restrictions

Master thesis for the MSc in Data Science and Economics at Università degli Studi di Milano

A machine learning method for confidence interval (CI) computation with specific application to Covid-19 forecast on 54 countries.

Comparative study of the main techniques used for COVID modeling where the information available is infected curve. The objective is to identify those univariate techniques that produce the best results, analyzing whether the more complex models are really able to provide better predictions.

This repo contains the final work of the Simulation and Modeling class, part of the MSc in Data Science and Business Analytics @ Bocconi University

Implementation of a SIRVSD model with different age groups and heterogeneous contacts in Python for Computational Models for Complex Systems Course

Understanding dynamics of COVID-19 in Delhi, India, using compartmental model that incorporates Testing bias and Misclassification.

Epidemiologic Compartmental Modeling Monad in R

Rebuilding https://github.com/mac-theobio/McMasterPandemic/