Assembly and intrahost/low-frequency variant calling for viral samples
SARS-CoV-2 workflow for nanopore sequence data
Climate science at high latitudes: eScience for linking Arctic measurements and modeling
a set of tools for viral amplicon schemes
A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.
quick demo of the ARTIC pipeline
Nextflow pipeline to process SARS-CoV-2 genomes by Nanopore Sequencing using ARTIC (https://github.com/artic-network/fieldbioinformatics) tools
Preprocessing of raw reads obtained using ARTIC's protocol for sequencing SARS-CoV-2 genome.
Pipeline to generate consensus.fasta files and identify pangolin lineage and nextstrain clade of Sars-CoV-2 genomes from ONT sequencing
SINTONIZAR PID CON ARDUINO – CONTROL DE POSICIÓN DE UNA PELOTA EN LEVITACIÓN
CODEHOP-mediated genotyping of HIV-1
Article Search Web-App
App that uses React and the Art Institute of Chicago's API to allow users to browse different art pieces.
My goal is to see how the choice of a reference genome affects the artic pipelines accuracy.
Add a description, image, and links to the artic topic page so that developers can more easily learn about it.
To associate your repository with the artic topic, visit your repo's landing page and select "manage topics."